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The map label for this gene is phaC [H]

Identifier: 54295106

GI number: 54295106

Start: 2499740

End: 2501527

Strand: Direct

Name: phaC [H]

Synonym: lpl2186

Alternate gene names: 54295106

Gene position: 2499740-2501527 (Clockwise)

Preceding gene: 54295104

Following gene: 54295107

Centisome position: 74.72

GC content: 41.39

Gene sequence:

>1788_bases
ATGAAAAAAACAACCGAAAAACCTATCAATAAAACAAAAAAAATGCCTGCATCCTCAAAAAAAGAAACCCTAAATCCACT
GGAACAAACGCCTTCTCCCGAGCAATCCGATCCCATTTTCAGATTTATTGATAAGTTATATCAAGCTAACCTGGGAAAGT
TAACTGCTGGTATAAGTCCTGCTGCGCTAGGTACAGCCTATTACTCCTGGTTTGCTCAATTGCTACAGTCACCTGGTTCA
ATGCTACGACTGGCTTATTATCCGCTGTTGCATGCCAACGATTATCTTTCCAACCTTTTCAAGTATGACAAGCCCAGAGA
TGGCAAGGATGTACGTTTTCATACAGAAAACTGGAGTTATTATCCCTGGCGGCTTTGGGCTGAGCAATTTCTCCAATTTG
AAGATTGGTGTTTACAAGCCTCAAGCAAAGTTCCAGGTATACCACTTCATGTCAAAAGAACAGTAACCTTTTCCACCAGA
CAGATTCTTGACGCCTTGTCACCTTCCAATTTTGTTTTGACTAATCCTGATTTGCTTCAGGAAACAATTCGCTCGAACGG
GCAAAATTTAATTCGCGGAACAGAGCTTGCCTTTCAGGATTTTGTAGAAAAGATAACAGGCTCACCTCCTGCGGGAGTCG
AGAATTTTATCCCGGGAAAACAAGTTGCTGTAACAGAGGGGAAAGTCGTTTATAGCAATCATTTAATTGAATTAATCCAG
TACACACCCCAAACAGAAAAGGTATACAAAGAACCGATCTTGATTTTACCCGCCTGGATCATGAAATATTATATCCTGGA
TTTGCTGCCGGAAAACTCTTTAGTAAACTGGCTGGTTAGACAGGGGCATACTGTATTTATTGTATCTTGGCGCAATCCAA
CGAAAGAAGATAGAAATATTGGACTGGATGATTATTATAAGTTGGGCGCTATGGATGCCATAAATGCAGTGAGCAATGCC
ATTCCACATACCAAAATCCATTTGATGGGTTATTGTCTTGGGGGCACCCTGGCTCTGTTAACCGCAGCAGCGATGGCTCA
TGATCACGATAACCGTCTGAAAACATTATCCTTGCTCGCTGCTCAAGGCGATTTTATTGATGCCGGAGAGCTACTGCTCT
TTATAACCAAAAGTGAAGTATCCTTTTTAAAAAGTATGATGTGGGAGCAAGGATATCTGGACACAAAACAAATGTCTGGA
ACTTTTCAAATGCTCCGTTCGTACGATTTGATTTGGTCTAAAATGGTTCAGGATTACATGCACGGGACTCAAAGAGGGAT
GATCCCTTTACTGGCATGGAACGCCGACGCAACTCGTATGCCATATAAAATGCATAGTGAATACCTGGAAAAACTGTTCC
TTAATAATGATTTTGCCGAAGGCCGATTTATTCTGGACGGAAAACCTGTCGTAGGAGAAAATATTAGGATGCCTGCTTTT
GTTGTAAGTACAGAAAAAGATCACGTGGCTCCCTGGAAATCAGTGTACAAAACCCATTTGTTAATCAATTCCGATATTAC
CTTTGTCTTGACTAATGGGGGTCATAACGCTGGAATTGTCAGCGAACCGGGGCATGAGGGACGTTATTATCGTATTCGGG
AAAGAAAAATGGATTCAACCTATCTTGACCCAACAAACTGGCTAAAAAAGGCTGAATTAAGAGAAGGATCCTGGTGGATT
GCCTGGCACGATTGGTTAGTTAATCACTCATCCCAAAAACAGGTGTCTGCGCCCAAACTGGACAAAAATTTACCCAATGC
TCCTGGAAAATATGTATTACAAAAATAA

Upstream 100 bases:

>100_bases
GAAACTTAAGCCTTTTCAAACGATAACTCAGATTAAATTGTCATTTATGGAATGCTGCTATACTATTTTTTATAAATCAA
ACGCCTACAGGACGCAAGGT

Downstream 100 bases:

>100_bases
AGGAATTAGTAATGAATGATGAATTTCTTGAAAATGTCACTTATGAAGAACTGACTATAGGGCGCAAGGCCAGCTTAAAC
CGTACATTAACTCAGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MKKTTEKPINKTKKMPASSKKETLNPLEQTPSPEQSDPIFRFIDKLYQANLGKLTAGISPAALGTAYYSWFAQLLQSPGS
MLRLAYYPLLHANDYLSNLFKYDKPRDGKDVRFHTENWSYYPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFSTR
QILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGKQVAVTEGKVVYSNHLIELIQ
YTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNIGLDDYYKLGAMDAINAVSNA
IPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMSG
TFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAEGRFILDGKPVVGENIRMPAF
VVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDSTYLDPTNWLKKAELREGSWWI
AWHDWLVNHSSQKQVSAPKLDKNLPNAPGKYVLQK

Sequences:

>Translated_595_residues
MKKTTEKPINKTKKMPASSKKETLNPLEQTPSPEQSDPIFRFIDKLYQANLGKLTAGISPAALGTAYYSWFAQLLQSPGS
MLRLAYYPLLHANDYLSNLFKYDKPRDGKDVRFHTENWSYYPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFSTR
QILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGKQVAVTEGKVVYSNHLIELIQ
YTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNIGLDDYYKLGAMDAINAVSNA
IPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMSG
TFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAEGRFILDGKPVVGENIRMPAF
VVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDSTYLDPTNWLKKAELREGSWWI
AWHDWLVNHSSQKQVSAPKLDKNLPNAPGKYVLQK
>Mature_595_residues
MKKTTEKPINKTKKMPASSKKETLNPLEQTPSPEQSDPIFRFIDKLYQANLGKLTAGISPAALGTAYYSWFAQLLQSPGS
MLRLAYYPLLHANDYLSNLFKYDKPRDGKDVRFHTENWSYYPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFSTR
QILDALSPSNFVLTNPDLLQETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGKQVAVTEGKVVYSNHLIELIQ
YTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNIGLDDYYKLGAMDAINAVSNA
IPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLAAQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMSG
TFQMLRSYDLIWSKMVQDYMHGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAEGRFILDGKPVVGENIRMPAF
VVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDSTYLDPTNWLKKAELREGSWWI
AWHDWLVNHSSQKQVSAPKLDKNLPNAPGKYVLQK

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 68050; Mature: 68050

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTEKPINKTKKMPASSKKETLNPLEQTPSPEQSDPIFRFIDKLYQANLGKLTAGISP
CCCCCCCHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCH
AALGTAYYSWFAQLLQSPGSMLRLAYYPLLHANDYLSNLFKYDKPRDGKDVRFHTENWSY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCC
YPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFSTRQILDALSPSNFVLTNPDLLQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCCCEEEECHHHHH
ETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGKQVAVTEGKVVYSNHLIELIQ
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCEEEHHHHHHHHH
YTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNI
CCCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCC
GLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLA
CCHHHHHHCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMSGTFQMLRSYDLIWSKMVQDYM
HCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAEGRFILDGKPVVGENIRMPAF
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEE
VVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDST
EEECCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHCCCCC
YLDPTNWLKKAELREGSWWIAWHDWLVNHSSQKQVSAPKLDKNLPNAPGKYVLQK
CCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTTEKPINKTKKMPASSKKETLNPLEQTPSPEQSDPIFRFIDKLYQANLGKLTAGISP
CCCCCCCHHHHHHCCCCCCHHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCH
AALGTAYYSWFAQLLQSPGSMLRLAYYPLLHANDYLSNLFKYDKPRDGKDVRFHTENWSY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCC
YPWRLWAEQFLQFEDWCLQASSKVPGIPLHVKRTVTFSTRQILDALSPSNFVLTNPDLLQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCCCEEEECHHHHH
ETIRSNGQNLIRGTELAFQDFVEKITGSPPAGVENFIPGKQVAVTEGKVVYSNHLIELIQ
HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCCEEEHHHHHHHHH
YTPQTEKVYKEPILILPAWIMKYYILDLLPENSLVNWLVRQGHTVFIVSWRNPTKEDRNI
CCCCHHHHHHCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCC
GLDDYYKLGAMDAINAVSNAIPHTKIHLMGYCLGGTLALLTAAAMAHDHDNRLKTLSLLA
CCHHHHHHCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AQGDFIDAGELLLFITKSEVSFLKSMMWEQGYLDTKQMSGTFQMLRSYDLIWSKMVQDYM
HCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HGTQRGMIPLLAWNADATRMPYKMHSEYLEKLFLNNDFAEGRFILDGKPVVGENIRMPAF
HHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEE
VVSTEKDHVAPWKSVYKTHLLINSDITFVLTNGGHNAGIVSEPGHEGRYYRIRERKMDST
EEECCCCCCCHHHHHHHHHEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEHHCCCCC
YLDPTNWLKKAELREGSWWIAWHDWLVNHSSQKQVSAPKLDKNLPNAPGKYVLQK
CCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]