Click here to switch to the map view.

The map label for this gene is 54295009

Identifier: 54295009

GI number: 54295009

Start: 2369149

End: 2371407

Strand: Direct

Name: 54295009

Synonym: lpl2089

Alternate gene names: NA

Gene position: 2369149-2371407 (Clockwise)

Preceding gene: 54295006

Following gene: 54295010

Centisome position: 70.81

GC content: 37.58

Gene sequence:

>2259_bases
ATGTTTGCTGAAATACCCAAAATTCAAGAACAATTTCATAACGTTTTTGAATATTCCCAATCCATGGCTTCTCTTTGGTT
ACAATCAATTGATAAAAGCCTTGAACAAACAAACAAGGTAACACAATCTTTCATCAACTTAAATTCGCAACAGGTTTATC
CTTATCCCAATATATTAAATGATGCCATTGAATATACCGTCGACTTCATGCAGAGAAGCATTCTGTTTTGGGACATCATG
CGTAAACGTGGCAATCAATATCTCAAGCATGAACAAGAGGGACAACCTCCTGTTCTCATTTTTTCTTATAATATGCTCAT
GGATGGCAGACATTTTGAGAGACCTGTAAATTATGCGTTGGTGGAAATCATTCCCCCTGAAGGCATACAGATTGATCCTG
CAAAAAGACCTTATGTGATTGTTGATCCGCGGGCTGGTCATGGAGCAGGAATCAGCGGTTTTAAAGACGCGTCACAAGTA
GGACTTGCCTTAAGAGCAGGACACCCAGTTTACGTTATTATCTTTTTCCCTGTTCCTGAACCCAATCAAACGCTAGTGGA
TGTCACCGCAGCCCACGAAAAATTTTTAACTGAAGTAGCCTTGCGTCACCCTCAAAGTCCCAAACCCTGCTTAATTGGTA
ATTGTCAGGGAGGATGGGCTATTTTAACCCTTATGGCCGCTAACCCAGATGTAGCAGGGGTCGCTGTAGTCAATGGCGCT
CCTCTTTCCTATTGGGGTGGGGAAAATGGAAAAAATCCCATGCACTACATCGGAGGAATTTGGGGAGGGAGCTGGATCGC
ACAGATGGCTGGTGATTTGGGTAACGGCAAATTTGACGGGGCTAATTTGGTAATGAACTTCGAAATGGCTAATCCTAAAG
TCACTTACTGGAGCAAATATTACAATCTCTTTGCCAATCTTGATAAAGAAGAAATCCGATTTTTAAATTTTGAGCGATGG
TGGGGAGGTTTTTCTCTTTTGAATGTGAACGAAATGAGAGGAATAATTGATAATTTGTTTATTGGTAACAAACTGGTCCA
TGGCAAAATACCCTTGGGGCAATCGGGTAATAACCTGGATTTAAGAAACATTAGCGTGCCTGTTATTATTTTCTGCTCGG
AAGGCGACAACATTACACCACCCCAACAAGCCTTAAACTGGGTTTCTGATCTTTATTCAAATACTCTGGAAATCAAATTG
GATGGACAAGTTATTGTTTATCTTATCCATAAGAGTGTTGGTCATTTAGGTATTTTTGTCTCAAGTGAGGTGGCTAAAAA
AGAACATAACCAGATTATTGATTTATTAAATTACATAGAACATTTGGCTCCGGGTTTATATGAACTAAAACTGAATGAAA
TAAAAGAAAATCCCAAGTCACCCCCATACTACCTTGCTTATATTGAAGAGCGCTCTATTAACGACATCAGGAAAGGACAG
GAGAGTAATGTAGCAATCTTCAACCTTGTTCGTATGGTATCTGAATACAATGCCATGAGCTATGACTTGTTTATGGCTCC
GATAATCCGTAATATAAGTAACGAATACACGGCAGAATTGATTCGAAAATTACACCCACTAAGGCAGAATCAGTATTTAT
TGAGTGATCTGAATCCATTAGTGCACCCTGTATCATGGATATCACCTTTTATTCGTCAAAATCGCATTAAAATTTCTGAA
AATAATCCTTTTTTAACTCAGCAATTAAATTTTTCAAAGCTTATAAACGCACTATGGGATTTTTGCAGCGCGTCTCGTGA
TAATACTGTGGAACTAATGTTTTATGCTGTCTATGGCTACATTCAATTATTAGCCCCATTTGATCCCAGAAGAGATATGA
TTGTTCATTCCCCTGAAAAAGATAATCAGGAAAAAATAACTCAATCAATTATTGCCCATATTAGTGATGGAGGTGTACCA
GAGGCCATTTTGCGAATATTACTATTATTAGTGAAAATTCAAGGCTATATCATTGGCGCTAACTTACCTGATGTCATTCA
AAAACTACGTGAATGCAATGCTCTTAAACATTTAGATAAAAATGGATTCAAACAAATTGTGCACTCACAAACAATAATGA
TAGAGCATGATCCTGAACTTGCATTTAATACAATACCTCATTTACTGAAATCACAAGAAGAACGCTCAATGGTCATTCAA
TTCATTGAAGATATATTAAAATCTTTAAAAGTATCCCCTTCCGAAGAATATAAAAAGAAATTTCAAAGAATAAAAGAACT
GTTACAAAACCAGGCTTGA

Upstream 100 bases:

>100_bases
CCCTTGACCCTGACCAACAAGCCAGAACGCGTTAAAAAGGCTAAAAAGAAGCGCGGATGGAAGTAAAGAACCCCGAATTG
AGAAGTCACAGGAGAAAAAG

Downstream 100 bases:

>100_bases
TTTCCGAATTGAGCCATACTGCTCTCAATCAAGCCTAAACCTATAGATATCCTGTTGGAAAATTAACTCTTCATCTTTTA
GACAAATGAAATCCCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MFAEIPKIQEQFHNVFEYSQSMASLWLQSIDKSLEQTNKVTQSFINLNSQQVYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMHYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNEIKENPKSPPYYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFCSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQA

Sequences:

>Translated_752_residues
MFAEIPKIQEQFHNVFEYSQSMASLWLQSIDKSLEQTNKVTQSFINLNSQQVYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMHYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNEIKENPKSPPYYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFCSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQA
>Mature_752_residues
MFAEIPKIQEQFHNVFEYSQSMASLWLQSIDKSLEQTNKVTQSFINLNSQQVYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMHYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNEIKENPKSPPYYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFCSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQA

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85674; Mature: 85674

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAEIPKIQEQFHNVFEYSQSMASLWLQSIDKSLEQTNKVTQSFINLNSQQVYPYPNILN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
DAIEYTVDFMQRSILFWDIMRKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEE
VEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQVGLALRAGHPVYVIIFFPVPE
EEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHCEEEECCCCEEEEEEEECCC
PNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEECCC
PLSYWGGENGKNPMHYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKY
CEEECCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHH
YNLFANLDKEEIRFLNFERWWGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLD
HHHHHCCCHHHHHEECHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCE
LRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKLDGQVIVYLIHKSVGHLGIFV
EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEEEEEECCCCCEEEEE
SSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNEIKENPKSPPYYLAYIEERSINDIRKGQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEEEEECCCHHHHHCCC
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCHH
VHPVSWISPFIRQNRIKISENNPFLTQQLNFSKLINALWDFCSASRDNTVELMFYAVYGY
HHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVPEAILRILLLLVKIQGYIIGA
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEC
NLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
CCHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHH
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAEIPKIQEQFHNVFEYSQSMASLWLQSIDKSLEQTNKVTQSFINLNSQQVYPYPNILN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHH
DAIEYTVDFMQRSILFWDIMRKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEE
VEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQVGLALRAGHPVYVIIFFPVPE
EEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHCEEEECCCCEEEEEEEECCC
PNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEECCC
PLSYWGGENGKNPMHYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKY
CEEECCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHH
YNLFANLDKEEIRFLNFERWWGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLD
HHHHHCCCHHHHHEECHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCE
LRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKLDGQVIVYLIHKSVGHLGIFV
EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEEEEEECCCCCEEEEE
SSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNEIKENPKSPPYYLAYIEERSINDIRKGQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEEEEECCCHHHHHCCC
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCHH
VHPVSWISPFIRQNRIKISENNPFLTQQLNFSKLINALWDFCSASRDNTVELMFYAVYGY
HHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVPEAILRILLLLVKIQGYIIGA
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEC
NLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
CCHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHH
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10094701 [H]