Click here to switch to the map view.

The map label for this gene is 54294998

Identifier: 54294998

GI number: 54294998

Start: 2340937

End: 2341296

Strand: Direct

Name: 54294998

Synonym: lpl2077

Alternate gene names: NA

Gene position: 2340937-2341296 (Clockwise)

Preceding gene: 54294997

Following gene: 54294999

Centisome position: 69.97

GC content: 38.89

Gene sequence:

>360_bases
ATGATGAGTCGCGAAAAAGCAGCTGGAACTTTTTTTAAAGATTACCAGAAAAAAAATGTAATGAGAGTGTTACAAGACTC
TCTCGAAAAAATTATCAACGAATGGCTGAAAACTGATGATGAAAGCCATACCAAACTGAGAAGTCTTCAAGAACTTTCAG
AGATGGATATTAATGCTACCTCATTTGCTGAACACTCACCACTTCCTGATTTTGTTACGCGTCTCTGGCTGGATCCACAT
AAAGCGCTTGATGCCTTGGACCAAAAGATTTCAAAAAGCGAAATCAGAAAGCTGATTAAAGAAACGGCAAGAGAAACAGA
GTTAGTTTTCACTCATCAAAAGGCACCGCCCTACTCCTAA

Upstream 100 bases:

>100_bases
GGGACCAAGCTAGTCAATGAAACAATAAAAATCAATTAAATTATAAATTGTTCTAAAATTGTATTAATGGGTGTTTGAAA
ATAACGAAGGAGTTTGATTT

Downstream 100 bases:

>100_bases
TTTAAATTAGGATAGTGCGGGTATATTAATTGGCCATTCATGTTGGACATATTATTGGACAAACAGGTCTTATTGGATAA
AAACATTCATAGAATGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MMSREKAAGTFFKDYQKKNVMRVLQDSLEKIINEWLKTDDESHTKLRSLQELSEMDINATSFAEHSPLPDFVTRLWLDPH
KALDALDQKISKSEIRKLIKETARETELVFTHQKAPPYS

Sequences:

>Translated_119_residues
MMSREKAAGTFFKDYQKKNVMRVLQDSLEKIINEWLKTDDESHTKLRSLQELSEMDINATSFAEHSPLPDFVTRLWLDPH
KALDALDQKISKSEIRKLIKETARETELVFTHQKAPPYS
>Mature_119_residues
MMSREKAAGTFFKDYQKKNVMRVLQDSLEKIINEWLKTDDESHTKLRSLQELSEMDINATSFAEHSPLPDFVTRLWLDPH
KALDALDQKISKSEIRKLIKETARETELVFTHQKAPPYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13906; Mature: 13906

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSREKAAGTFFKDYQKKNVMRVLQDSLEKIINEWLKTDDESHTKLRSLQELSEMDINAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
SFAEHSPLPDFVTRLWLDPHKALDALDQKISKSEIRKLIKETARETELVFTHQKAPPYS
HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMSREKAAGTFFKDYQKKNVMRVLQDSLEKIINEWLKTDDESHTKLRSLQELSEMDINAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHH
SFAEHSPLPDFVTRLWLDPHKALDALDQKISKSEIRKLIKETARETELVFTHQKAPPYS
HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA