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The map label for this gene is 54294879

Identifier: 54294879

GI number: 54294879

Start: 2198938

End: 2200137

Strand: Direct

Name: 54294879

Synonym: lpl1958

Alternate gene names: NA

Gene position: 2198938-2200137 (Clockwise)

Preceding gene: 54294878

Following gene: 54294880

Centisome position: 65.72

GC content: 35.75

Gene sequence:

>1200_bases
ATGCTAAACAAGGGATATATTAAAACAACACCCTATGGATTGGGATTTTCAGAACTTTTTTTCGAAGACAACTTAAAAAA
ATATTTTTCTGATCCTTCACTAGAAGTATTGTCAGCAGAATACTCTCCTTCTGCCAGTGATAAAATGGCATGGTCTGCCA
AACACCCCAAACAGGGGGATCACCCCATAGGAGTACAACGTTATAAAATAAGCTTTAAAAAAAACGGTAAAATACAAACC
CGCCATGTCATCGTCAAATCTAAAATTAGCGATAAGCATTATCTCCAGGTTATATCCAATGCCTTTACAAAATGCGGTAT
TCAAACGGAAATGCCTATCCTTGACTATTTATCACAACTGGAATTTTCAAATTTAAACAGGAAAGAAATCACTATTTACA
ATATGCAACATTCATTTGAAGCCTTTCAATATGCTATGCCATTATGCTATGGAACTTATTTAGACGAAAAAGAAGAAGCT
TGTGTATTAATTTTAGAATGCCTTGATGAAGAATGGCTATCCCTCGATCCTTATAATACCTCAAAATGGGATCAAACAGC
GATTGAAGCATTGATTGATGCAATTGCCTCAATGCACGCCGTCTGGTATAAAAAAGAGAACGCGATTACCGAGATCAAAG
GCTTCAAAAATCCTTTAAATACTGACCAAATGCAACGCTTGATGCCTTATTGGAATGCCTTGGCAAAGGCGGTGACAACA
TCAAATTTGCCTTTTCTTACAAAGGAAGATTATTTATTCCATACCCATCTTATTGAAACTATGCCGCAATGGCATATCAA
AATTGATGCTATGGCTAAAACATTGGTACAAAATGACTGTGTACCGAAAAATATTGCATTATGTAATCAAAATGGGACAA
AAAAAGTTTTGGTTTATGATTGGGAAATTGCAACTATTCATATACCACAACGCGATATTGTTGAGTTTTTGTCTTATGTC
TTACCTGAAAATTTCGATAGTACCTTATTAGGCAATTATATAGAGAGACATCGGGTAAAACTTGGCGAAACAATAAAACA
GCCGATTGATACAACAGAGTGGCGACTCGGATTTCAATATGCTTTATACGATTATTTAATACAGCGTGTTTTTCCACAAA
TACCTTTTGAAAAGCTTGAAGCTCGTAACATAGCAAAAGTGTATAACAATGCCCGCCGCATGATGGCCCTACTGAACTAA

Upstream 100 bases:

>100_bases
ATGAACAAGCCTAATCATTATAACTCTCTTCCCCAATAAATGTTCAATAAAGCTCAATGCTGCTATTCTTAATTAAAATA
GGATTGATAAGGGAGTGAAA

Downstream 100 bases:

>100_bases
TTTTCTGGAGTGATTAAGGATGACTCATATACGTGTAATACTACCCGGGTACAATACTAAAGTTTTAAACAAGGAAATGT
TGAAACCATTTGAAAGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Hydroxy-3-Methylglutaryl Co A Reductase; 3-Hydroxy-3-Methylglutaryl Co A Reductase-Like Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLNKGYIKTTPYGLGFSELFFEDNLKKYFSDPSLEVLSAEYSPSASDKMAWSAKHPKQGDHPIGVQRYKISFKKNGKIQT
RHVIVKSKISDKHYLQVISNAFTKCGIQTEMPILDYLSQLEFSNLNRKEITIYNMQHSFEAFQYAMPLCYGTYLDEKEEA
CVLILECLDEEWLSLDPYNTSKWDQTAIEALIDAIASMHAVWYKKENAITEIKGFKNPLNTDQMQRLMPYWNALAKAVTT
SNLPFLTKEDYLFHTHLIETMPQWHIKIDAMAKTLVQNDCVPKNIALCNQNGTKKVLVYDWEIATIHIPQRDIVEFLSYV
LPENFDSTLLGNYIERHRVKLGETIKQPIDTTEWRLGFQYALYDYLIQRVFPQIPFEKLEARNIAKVYNNARRMMALLN

Sequences:

>Translated_399_residues
MLNKGYIKTTPYGLGFSELFFEDNLKKYFSDPSLEVLSAEYSPSASDKMAWSAKHPKQGDHPIGVQRYKISFKKNGKIQT
RHVIVKSKISDKHYLQVISNAFTKCGIQTEMPILDYLSQLEFSNLNRKEITIYNMQHSFEAFQYAMPLCYGTYLDEKEEA
CVLILECLDEEWLSLDPYNTSKWDQTAIEALIDAIASMHAVWYKKENAITEIKGFKNPLNTDQMQRLMPYWNALAKAVTT
SNLPFLTKEDYLFHTHLIETMPQWHIKIDAMAKTLVQNDCVPKNIALCNQNGTKKVLVYDWEIATIHIPQRDIVEFLSYV
LPENFDSTLLGNYIERHRVKLGETIKQPIDTTEWRLGFQYALYDYLIQRVFPQIPFEKLEARNIAKVYNNARRMMALLN
>Mature_399_residues
MLNKGYIKTTPYGLGFSELFFEDNLKKYFSDPSLEVLSAEYSPSASDKMAWSAKHPKQGDHPIGVQRYKISFKKNGKIQT
RHVIVKSKISDKHYLQVISNAFTKCGIQTEMPILDYLSQLEFSNLNRKEITIYNMQHSFEAFQYAMPLCYGTYLDEKEEA
CVLILECLDEEWLSLDPYNTSKWDQTAIEALIDAIASMHAVWYKKENAITEIKGFKNPLNTDQMQRLMPYWNALAKAVTT
SNLPFLTKEDYLFHTHLIETMPQWHIKIDAMAKTLVQNDCVPKNIALCNQNGTKKVLVYDWEIATIHIPQRDIVEFLSYV
LPENFDSTLLGNYIERHRVKLGETIKQPIDTTEWRLGFQYALYDYLIQRVFPQIPFEKLEARNIAKVYNNARRMMALLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46464; Mature: 46464

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKGYIKTTPYGLGFSELFFEDNLKKYFSDPSLEVLSAEYSPSASDKMAWSAKHPKQGD
CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCC
HPIGVQRYKISFKKNGKIQTRHVIVKSKISDKHYLQVISNAFTKCGIQTEMPILDYLSQL
CCCCEEEEEEEECCCCCEEEEEEEEEHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EFSNLNRKEITIYNMQHSFEAFQYAMPLCYGTYLDEKEEACVLILECLDEEWLSLDPYNT
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCC
SKWDQTAIEALIDAIASMHAVWYKKENAITEIKGFKNPLNTDQMQRLMPYWNALAKAVTT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
SNLPFLTKEDYLFHTHLIETMPQWHIKIDAMAKTLVQNDCVPKNIALCNQNGTKKVLVYD
CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEE
WEIATIHIPQRDIVEFLSYVLPENFDSTLLGNYIERHRVKLGETIKQPIDTTEWRLGFQY
EEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALYDYLIQRVFPQIPFEKLEARNIAKVYNNARRMMALLN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNKGYIKTTPYGLGFSELFFEDNLKKYFSDPSLEVLSAEYSPSASDKMAWSAKHPKQGD
CCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCCCCCCC
HPIGVQRYKISFKKNGKIQTRHVIVKSKISDKHYLQVISNAFTKCGIQTEMPILDYLSQL
CCCCEEEEEEEECCCCCEEEEEEEEEHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
EFSNLNRKEITIYNMQHSFEAFQYAMPLCYGTYLDEKEEACVLILECLDEEWLSLDPYNT
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCC
SKWDQTAIEALIDAIASMHAVWYKKENAITEIKGFKNPLNTDQMQRLMPYWNALAKAVTT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
SNLPFLTKEDYLFHTHLIETMPQWHIKIDAMAKTLVQNDCVPKNIALCNQNGTKKVLVYD
CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEE
WEIATIHIPQRDIVEFLSYVLPENFDSTLLGNYIERHRVKLGETIKQPIDTTEWRLGFQY
EEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ALYDYLIQRVFPQIPFEKLEARNIAKVYNNARRMMALLN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA