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The map label for this gene is ychJ [C]

Identifier: 54294783

GI number: 54294783

Start: 2080960

End: 2081439

Strand: Direct

Name: ychJ [C]

Synonym: lpl1860

Alternate gene names: 54294783

Gene position: 2080960-2081439 (Clockwise)

Preceding gene: 54294782

Following gene: 54294784

Centisome position: 62.2

GC content: 36.25

Gene sequence:

>480_bases
ATGACTCTTTGCCCCTGTGGTTCACAAAATAAATATGAGCAATGTTGCGGGATTTATCTGGAAAGCAAGAAAACTCCGGA
AACACCAGAACAATTAATGCGTTCGAGATATACTGCGTATTCTCTTGCAAAAATCGATTATATTAAACAGACCATGCAAG
GCAAACCACTAATTGCTTTCAACGAATCAGAAGCAAAGCAGTGGGCTCAAAATGTTTCCTGGCTGGGTTTGAAAATCATT
CAAAGCTACATGGAGAGGCCGGATAAAGGATTTGTTGAATTTATAGCAACCTTTCTTGATGGAAATCAATTAAAAAATAT
TCATGAATTAAGTGAGTTTCAAAAGAATAATTCCGTTTGGTTTTATGTGGATGGGGAAGCTAAACAGTTACCAAATAAAC
AAGATAAGCAAAAGATAGGCCGCAATAGCCCATGTCCTTGTGGAAGTGGTAAAAAATTTAAAAACTGTCATGATAAATGA

Upstream 100 bases:

>100_bases
CTGTTTAGAAATAATGGAATGCCATATAGAATATAATCCGGGATTCGTTAATATAACGGATTGTGAATTTACCCATAAAC
CAGTTTTTACAGGTAACTAA

Downstream 100 bases:

>100_bases
ATTAAACTCAAGGTAGCAGATGAACGGTCACTTACTCCTCAATGTTTTCATTTTCCTTGCTGCTGCAAGCATCATGGTTC
CACTGGCAAGCCGATTTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKII
QSYMERPDKGFVEFIATFLDGNQLKNIHELSEFQKNNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK

Sequences:

>Translated_159_residues
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKII
QSYMERPDKGFVEFIATFLDGNQLKNIHELSEFQKNNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
>Mature_158_residues
TLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAFNESEAKQWAQNVSWLGLKIIQ
SYMERPDKGFVEFIATFLDGNQLKNIHELSEFQKNNSVWFYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=155, Percent_Identity=40.6451612903226, Blast_Score=121, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 18317; Mature: 18186

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAF
CCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NESEAKQWAQNVSWLGLKIIQSYMERPDKGFVEFIATFLDGNQLKNIHELSEFQKNNSVW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
FYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
EEECCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLCPCGSQNKYEQCCGIYLESKKTPETPEQLMRSRYTAYSLAKIDYIKQTMQGKPLIAF
CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
NESEAKQWAQNVSWLGLKIIQSYMERPDKGFVEFIATFLDGNQLKNIHELSEFQKNNSVW
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEE
FYVDGEAKQLPNKQDKQKIGRNSPCPCGSGKKFKNCHDK
EEECCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA