Click here to switch to the map view.

The map label for this gene is 54294724

Identifier: 54294724

GI number: 54294724

Start: 2016320

End: 2016487

Strand: Direct

Name: 54294724

Synonym: lpl1801

Alternate gene names: NA

Gene position: 2016320-2016487 (Clockwise)

Preceding gene: 54294723

Following gene: 54294731

Centisome position: 60.27

GC content: 38.1

Gene sequence:

>168_bases
ATGAGTACTCGTCGCTTTGATGAATTTGACAATGAAATGGATGATTTTAGTGATGCTGAACCTGTTATAACTGAGGCAAG
CCCTTCAACAAAATTGGAAAGACGTAGAAAAATAGAAGATCTGTTGGAGGAAAAGCGGTTAAGAGAAGAACTGGAAGAGT
TTGGTTAG

Upstream 100 bases:

>100_bases
AGGTGGTATTTAAAAATAAAGTGCCAGTATAACTATTCCAGGTATTTTGGTATCATCGAGAATAGATATGGAATTCAACG
GGTTAGCTAAGGAGAAAGCT

Downstream 100 bases:

>100_bases
TTGGAAGAAAATTGAGGCATATAAATGTCAAACCTTACAGTCTTACCATCAATTGAGGCATCGGGCGGGAGTAATGGTTT
TACCTTTTGTGGCCACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MSTRRFDEFDNEMDDFSDAEPVITEASPSTKLERRRKIEDLLEEKRLREELEEFG

Sequences:

>Translated_55_residues
MSTRRFDEFDNEMDDFSDAEPVITEASPSTKLERRRKIEDLLEEKRLREELEEFG
>Mature_54_residues
STRRFDEFDNEMDDFSDAEPVITEASPSTKLERRRKIEDLLEEKRLREELEEFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6637; Mature: 6506

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRRFDEFDNEMDDFSDAEPVITEASPSTKLERRRKIEDLLEEKRLREELEEFG
CCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STRRFDEFDNEMDDFSDAEPVITEASPSTKLERRRKIEDLLEEKRLREELEEFG
CCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA