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The map label for this gene is garP [C]

Identifier: 54294703

GI number: 54294703

Start: 1991793

End: 1992893

Strand: Direct

Name: garP [C]

Synonym: lpl1780

Alternate gene names: 54294703

Gene position: 1991793-1992893 (Clockwise)

Preceding gene: 54294701

Following gene: 54294711

Centisome position: 59.53

GC content: 39.06

Gene sequence:

>1101_bases
ATGCACGAAGAACATATTTCCGCACTCAGCGCAGGACTTTTAAGTAGCGCCTTTTACTATGTCTATACTTCTTTTCAAAT
TCCTGTCGGGATTCTTTTTGATCGCTACAATACCCGATATTTGTTATCGGTCAATGCAGCTCTTTGTGCCATCGGATGTT
TTGTATTTGCCTCGGGACATAACCTCCCGACTCTTTTCCTTGGGCGATTAATTATTGGCGCTGGTTCAGCCTTTGCCTTT
ATTGGTTTAAGTCATTTGTTACGCCAACATTTCCCCTTAAAACAATACGCTTTTATGATAGGCCTATCAGAAACGTTGGG
ATTTACTGTTACAGTATTAGGGATGATTGGCATGGGTTCTGTGATCAGCCATTTTGGATGGCGTTATTTTATTAACATAG
CAGGAATCATTGGATTCTTGATCGCCAGTTTATGCTGGCTGTGTATCCCCAATAGCAAGCCAATCGTTTCTTTTCCACAC
AAATATAAACAACAAATTATTCCCATTCTAAAAAATAAATTAGCCTGGTTTAATGGCCTTTTTGTTTGTCTGGAATTCTC
AGTAATTACCGTTTTTGCCGCTATGTGGGCTGTTCCTTTTTTACAATTAAAACTGGATTGCACTATCAAAACAGCCAGTA
TACTAACTTCAATGGTCTTACTCGGTGCTGGCTTAAGCTGTCCTTTATTGGGTCAAATTTCGGTACATCTCAATAGACGA
AAACCGCTGATTCATGCTTCTTGTCTGTCAACTGCGTTATTATTAATACTTGTTTTATATTTACCAACTCAAAATAATCT
GTTGATAGGTATATTAATGTTTTCTATGGGGTTAACCTGTGGTGCTTATATGTTAGCCTATTCCATTTCTAATGAACTGG
CCCCACCTGAATTCTTATCCACTTGTACTGGCTTCACCAATACCTTGGCAATGCTTTCGGCTCCCTTACTTCAACCACTC
GTTGGATTTTTTTTAGATGTGCTCAGTAACCATAAAAGCCAATACAGCTTGGCAAACTACCAACTGGCCCTTTTGATTGT
TCCTTTTGCCATGCTATTGGCAAGCTTATTTACTTGCCTCCTGCCAGAAAAATCAAATTAG

Upstream 100 bases:

>100_bases
TATTAAGAAATCAAAAATCACCATTTGGTTGGTAGGAGTATTTTTTTTATTATTCCAATTCTTCTTGCAACTATCCTCTG
GGATCATTGTAGGCGCAATA

Downstream 100 bases:

>100_bases
ACTATCCCAAATTAGTAACAGCTTGTACTGCTGACTCCTTGATTTGCTTAAAAGTTTGTTTGGATATAAAACAAAATCCT
TTTGGATTTTCTTCAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Sugar Phosphate Permease; Sugar Transporter; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; Facilitator Protein; Permease; Transporter Facilitator Family; Facilitator Family Oxalate/Formate Antiporter; Sugar Transport Family Protein; Multidrug ABC Transporter; NasA Protein; MFS Transporter; Facilitator Membrane Proteins; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Permease Of Facilitator Superfamily; Transmembrane Transporter; Transporter Facilitator Family Protein; Facilitator Superfamily Protein Permease; Transport Proteins; MFS Family Transporter; Facilitator Family Protein; Facilitator Superfamily Transporter Transporter; MFS Superfamily Transporter

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNAALCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAF
IGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPIVSFPH
KYKQQIIPILKNKLAWFNGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRR
KPLIHASCLSTALLLILVLYLPTQNNLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPL
VGFFLDVLSNHKSQYSLANYQLALLIVPFAMLLASLFTCLLPEKSN

Sequences:

>Translated_366_residues
MHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNAALCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAF
IGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPIVSFPH
KYKQQIIPILKNKLAWFNGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRR
KPLIHASCLSTALLLILVLYLPTQNNLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPL
VGFFLDVLSNHKSQYSLANYQLALLIVPFAMLLASLFTCLLPEKSN
>Mature_366_residues
MHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNAALCAIGCFVFASGHNLPTLFLGRLIIGAGSAFAF
IGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIGMGSVISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPIVSFPH
KYKQQIIPILKNKLAWFNGLFVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRR
KPLIHASCLSTALLLILVLYLPTQNNLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLSTCTGFTNTLAMLSAPLLQPL
VGFFLDVLSNHKSQYSLANYQLALLIVPFAMLLASLFTCLLPEKSN

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40145; Mature: 40145

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNAALCAIGCFVFASGH
CCHHHHHHHHHHHHHHHHHHHHEECCCCHHHEEECCCCEEEEEHHHHHHHHHHHHHCCCC
NLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIGMGS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPIVSFPHKYKQQIIPILKNKLAWFNGL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
FVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRR
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHCCCCCCCEECCEEEEECCC
KPLIHASCLSTALLLILVLYLPTQNNLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSLANYQLALLIVPFAMLLASLFTCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPEKSN
CCCCCC
>Mature Secondary Structure
MHEEHISALSAGLLSSAFYYVYTSFQIPVGILFDRYNTRYLLSVNAALCAIGCFVFASGH
CCHHHHHHHHHHHHHHHHHHHHEECCCCHHHEEECCCCEEEEEHHHHHHHHHHHHHCCCC
NLPTLFLGRLIIGAGSAFAFIGLSHLLRQHFPLKQYAFMIGLSETLGFTVTVLGMIGMGS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISHFGWRYFINIAGIIGFLIASLCWLCIPNSKPIVSFPHKYKQQIIPILKNKLAWFNGL
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
FVCLEFSVITVFAAMWAVPFLQLKLDCTIKTASILTSMVLLGAGLSCPLLGQISVHLNRR
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHCCCCCCCEECCEEEEECCC
KPLIHASCLSTALLLILVLYLPTQNNLLIGILMFSMGLTCGAYMLAYSISNELAPPEFLS
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
TCTGFTNTLAMLSAPLLQPLVGFFLDVLSNHKSQYSLANYQLALLIVPFAMLLASLFTCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LPEKSN
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA