Click here to switch to the map view.

The map label for this gene is 54294641

Identifier: 54294641

GI number: 54294641

Start: 1917424

End: 1917972

Strand: Reverse

Name: 54294641

Synonym: lpl1718

Alternate gene names: NA

Gene position: 1917972-1917424 (Counterclockwise)

Preceding gene: 54294642

Following gene: 54294640

Centisome position: 57.33

GC content: 32.42

Gene sequence:

>549_bases
ATGAATACATTAAAATTACTATTTTCTTATTACTGGCGTCTTAGCCTATTGAAGGAAACCCCGGAGAATTCTCCTTATTC
CGTTTTTCTTCTTATAGTAATGAGTGTTCTGTTCTCTATTATAATGCTGATTCAATGGAATATTGCCGAACTTGATTTTT
CTCGCGATTGGTTATTAAGTTTAATGATGGCAACGAGCCTGATTTTGTCTTTTATATTCTATACCTATGTTATTTTAAAG
TTTCAAAATCTTGCGTCCAGGCTAGTACAAACATCAACATGTTTATTGAGTGCCTATATTATTATACATGTTTTGGCGAC
ACCATTGTTCTTAATTGACACTTATTTGTCTGCGGAGAATCTTAAAACCCCCATTTTTTTATTTATAGGTATGATATATT
TGTTCATTACTTTGGGGCTTTCTATTTGGCAATTTGTAATCACAGCCCATATTTATAAGTTTGCTTTAGGCACTACACCG
ATAAAATCAGTTTTAGCTGCTTTTGGTTTAGTCGCTGTTAACATTTTAACTATTTCTTTTTGGCGATGA

Upstream 100 bases:

>100_bases
GTAAACAGTTATGAAGTCACTTAGGGCTTATGGAGGAATATAAAATATTCTGCCTTGTTCAGAGAGTACTTAAGCCTCAA
GAAAATAATCAAAAATAATT

Downstream 100 bases:

>100_bases
CATGATGACACATTTGCATATACTAGGAGTAAGTGGAACCTTTATGAGTGCCTTGGCTTTGCTCGCCCGCGACGCAGGAT
ATAGGGTGACAGGAAGCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNTLKLLFSYYWRLSLLKETPENSPYSVFLLIVMSVLFSIIMLIQWNIAELDFSRDWLLSLMMATSLILSFIFYTYVILK
FQNLASRLVQTSTCLLSAYIIIHVLATPLFLIDTYLSAENLKTPIFLFIGMIYLFITLGLSIWQFVITAHIYKFALGTTP
IKSVLAAFGLVAVNILTISFWR

Sequences:

>Translated_182_residues
MNTLKLLFSYYWRLSLLKETPENSPYSVFLLIVMSVLFSIIMLIQWNIAELDFSRDWLLSLMMATSLILSFIFYTYVILK
FQNLASRLVQTSTCLLSAYIIIHVLATPLFLIDTYLSAENLKTPIFLFIGMIYLFITLGLSIWQFVITAHIYKFALGTTP
IKSVLAAFGLVAVNILTISFWR
>Mature_182_residues
MNTLKLLFSYYWRLSLLKETPENSPYSVFLLIVMSVLFSIIMLIQWNIAELDFSRDWLLSLMMATSLILSFIFYTYVILK
FQNLASRLVQTSTCLLSAYIIIHVLATPLFLIDTYLSAENLKTPIFLFIGMIYLFITLGLSIWQFVITAHIYKFALGTTP
IKSVLAAFGLVAVNILTISFWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20963; Mature: 20963

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLKLLFSYYWRLSLLKETPENSPYSVFLLIVMSVLFSIIMLIQWNIAELDFSRDWLLS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LMMATSLILSFIFYTYVILKFQNLASRLVQTSTCLLSAYIIIHVLATPLFLIDTYLSAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKTPIFLFIGMIYLFITLGLSIWQFVITAHIYKFALGTTPIKSVLAAFGLVAVNILTISF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
WR
CC
>Mature Secondary Structure
MNTLKLLFSYYWRLSLLKETPENSPYSVFLLIVMSVLFSIIMLIQWNIAELDFSRDWLLS
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LMMATSLILSFIFYTYVILKFQNLASRLVQTSTCLLSAYIIIHVLATPLFLIDTYLSAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LKTPIFLFIGMIYLFITLGLSIWQFVITAHIYKFALGTTPIKSVLAAFGLVAVNILTISF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
WR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA