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The map label for this gene is 54294606

Identifier: 54294606

GI number: 54294606

Start: 1874751

End: 1876436

Strand: Reverse

Name: 54294606

Synonym: lpl1682

Alternate gene names: NA

Gene position: 1876436-1874751 (Counterclockwise)

Preceding gene: 54294609

Following gene: 54294603

Centisome position: 56.09

GC content: 34.1

Gene sequence:

>1686_bases
ATGCAAAATAGAGCAAAAAATAATCTAATAGAGTATAATGGGTCCTTGATGATTATTTTATATGATTTTTTACAAGAGAG
CAGTGTTATGCCAAGAAGCAAGAATGATAGCAAACTTAAAAAGAAAAGTGCCCTTCAGTCAAAGTTTAAAGAACAGCAAT
TGAATCATGGTAGTAAAGAGCACAAATCTAAATTTAAATTTTCCCAAAGAAAGGCAAAGAAAAAAGGACCTGGGATGACA
CACCTCCCAGGTAATATTTACACGCTGTTTACTCCTGTCAATGGACCGGAAAGTAATCATGAATTGATTGCCACGAGCAA
GATTATGGTTGATTTACATATTGATAACATGTCTGGCAATGATTACATTCCGTCTGCTATAGACAGAACCGATCTCGTTA
TTGTTCAACCTGTCCATTTACTCAGAAAAACCGGTGGACGAGGTTTATTTGCCAGAGAAGACATTCCAAAAGGAACGTGC
ATTGGTATTTACACAGGAGAAGTGTATTCTGAACAAGAATTTGAACAATATCTAATGGAACATGTTGGTTCTGATAAAAG
TTATGCGATGTATGTCGGGGGCCGGGTAGTCGATGCGGCAAGAAAAGGTAATTTGACTCGTTATATCAATTTTTCTGATA
GCCAGGATAACGCAGAATTTGTTGAAGGTACATTGAATCGCAAGAAAGTTGTAAAAGTAATAACCACCAAAAACATCAAG
ACAGGGCAACAACTATTAATCAACTATAATACTTACGAAGAGCAAGCCTCCAGGTATTATTACTTTCTTAATCCTGGCGA
TGGTTGGCTATCTGCACAGGAATTTTATCAAACTCACCAATCTCAATACCGATTAGAACAAATGCCCTATAATTTGGAAG
GATTTGATCTTAAAGCAGGGGATAGAGTTTTAATGACTCAAATAGGACGGATAATTTTTGCTAACTATTCTCTTGCAAAA
GAACAAGAATTAAATGCCTCAGATATCGATTTGCCATTTTTAAAAGTGTGCTCTGACGAAAAAATATTAGATTTTGATGA
AGCGGATACATTCACCCCTTTGATGGTCGCCTGTTATCTTGGACAAGTTGAAAATGTAAAATGGCTTATTGAACATGGTG
CTAATATCGATCAACAGCAAAGTCATTCTGGTCATTGTCCTTTGAGTTTGACATTGAAAGGATATTCTTTAGCGAAGGAT
ACCCAAAAATACATTGATATCATTCAGCTATTGATTAAAAATCAGGTTAATCTTTTAGTGCATGACCGATCAGACAAGAC
TTTTTTACATAATGCCGCATTAGTACTGAATAACCTTGATTTTCAATCTGTTGTAAAATTTTTAATAGGACAAAATCCTA
TTGATATCAATGAATACTTTACATACATCGATGAGAATGATTTCGATATCGTCATGCATTGTTATAACAATAAATTATTT
GATAAAGCTCTTGTTTTATTGGCTTTTTATCCGGATTACTTTAAAAGAAATTATATGAGTGATAATGAAGGGCATAATCA
ATTTAATATCAATGCTTTTAGAAAAGCGATAAAAGATTTTAATGCAAATGAGCGTAGTATTTTATTAATGCAGCTAAGGC
AGAGCGGTTTACATTTGTCTGAAGACTTGTTAGAGCAATTAGGTATTATGGATTCAAGTATCACACTTGAAAGCAAGTTT
TTTTGA

Upstream 100 bases:

>100_bases
CCCATTATGGTTTATCCAAAATCATAAATGTTAGCACATGGGTAAGAGGAGCAACAATACTCTTCAATCAGCAAAATAAT
AGATTTTCAATGAAAATCAC

Downstream 100 bases:

>100_bases
TTTTTCATATTGACATATTTTATACCTGGAACTTAAATTGGGACTTTAGATAAATTTGTGTAACTGTCTATCACTCCAGC
CTGAAAGGCTAAGGATATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MQNRAKNNLIEYNGSLMIILYDFLQESSVMPRSKNDSKLKKKSALQSKFKEQQLNHGSKEHKSKFKFSQRKAKKKGPGMT
HLPGNIYTLFTPVNGPESNHELIATSKIMVDLHIDNMSGNDYIPSAIDRTDLVIVQPVHLLRKTGGRGLFAREDIPKGTC
IGIYTGEVYSEQEFEQYLMEHVGSDKSYAMYVGGRVVDAARKGNLTRYINFSDSQDNAEFVEGTLNRKKVVKVITTKNIK
TGQQLLINYNTYEEQASRYYYFLNPGDGWLSAQEFYQTHQSQYRLEQMPYNLEGFDLKAGDRVLMTQIGRIIFANYSLAK
EQELNASDIDLPFLKVCSDEKILDFDEADTFTPLMVACYLGQVENVKWLIEHGANIDQQQSHSGHCPLSLTLKGYSLAKD
TQKYIDIIQLLIKNQVNLLVHDRSDKTFLHNAALVLNNLDFQSVVKFLIGQNPIDINEYFTYIDENDFDIVMHCYNNKLF
DKALVLLAFYPDYFKRNYMSDNEGHNQFNINAFRKAIKDFNANERSILLMQLRQSGLHLSEDLLEQLGIMDSSITLESKF
F

Sequences:

>Translated_561_residues
MQNRAKNNLIEYNGSLMIILYDFLQESSVMPRSKNDSKLKKKSALQSKFKEQQLNHGSKEHKSKFKFSQRKAKKKGPGMT
HLPGNIYTLFTPVNGPESNHELIATSKIMVDLHIDNMSGNDYIPSAIDRTDLVIVQPVHLLRKTGGRGLFAREDIPKGTC
IGIYTGEVYSEQEFEQYLMEHVGSDKSYAMYVGGRVVDAARKGNLTRYINFSDSQDNAEFVEGTLNRKKVVKVITTKNIK
TGQQLLINYNTYEEQASRYYYFLNPGDGWLSAQEFYQTHQSQYRLEQMPYNLEGFDLKAGDRVLMTQIGRIIFANYSLAK
EQELNASDIDLPFLKVCSDEKILDFDEADTFTPLMVACYLGQVENVKWLIEHGANIDQQQSHSGHCPLSLTLKGYSLAKD
TQKYIDIIQLLIKNQVNLLVHDRSDKTFLHNAALVLNNLDFQSVVKFLIGQNPIDINEYFTYIDENDFDIVMHCYNNKLF
DKALVLLAFYPDYFKRNYMSDNEGHNQFNINAFRKAIKDFNANERSILLMQLRQSGLHLSEDLLEQLGIMDSSITLESKF
F
>Mature_561_residues
MQNRAKNNLIEYNGSLMIILYDFLQESSVMPRSKNDSKLKKKSALQSKFKEQQLNHGSKEHKSKFKFSQRKAKKKGPGMT
HLPGNIYTLFTPVNGPESNHELIATSKIMVDLHIDNMSGNDYIPSAIDRTDLVIVQPVHLLRKTGGRGLFAREDIPKGTC
IGIYTGEVYSEQEFEQYLMEHVGSDKSYAMYVGGRVVDAARKGNLTRYINFSDSQDNAEFVEGTLNRKKVVKVITTKNIK
TGQQLLINYNTYEEQASRYYYFLNPGDGWLSAQEFYQTHQSQYRLEQMPYNLEGFDLKAGDRVLMTQIGRIIFANYSLAK
EQELNASDIDLPFLKVCSDEKILDFDEADTFTPLMVACYLGQVENVKWLIEHGANIDQQQSHSGHCPLSLTLKGYSLAKD
TQKYIDIIQLLIKNQVNLLVHDRSDKTFLHNAALVLNNLDFQSVVKFLIGQNPIDINEYFTYIDENDFDIVMHCYNNKLF
DKALVLLAFYPDYFKRNYMSDNEGHNQFNINAFRKAIKDFNANERSILLMQLRQSGLHLSEDLLEQLGIMDSSITLESKF
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64440; Mature: 64440

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION ; PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRAKNNLIEYNGSLMIILYDFLQESSVMPRSKNDSKLKKKSALQSKFKEQQLNHGSKE
CCCCCCCCEEEECCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
HKSKFKFSQRKAKKKGPGMTHLPGNIYTLFTPVNGPESNHELIATSKIMVDLHIDNMSGN
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCC
DYIPSAIDRTDLVIVQPVHLLRKTGGRGLFAREDIPKGTCIGIYTGEVYSEQEFEQYLME
CCCCCCCCCCCEEEECCHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHH
HVGSDKSYAMYVGGRVVDAARKGNLTRYINFSDSQDNAEFVEGTLNRKKVVKVITTKNIK
HCCCCCCEEEEECCEEEEHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCC
TGQQLLINYNTYEEQASRYYYFLNPGDGWLSAQEFYQTHQSQYRLEQMPYNLEGFDLKAG
CCCEEEEECCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC
DRVLMTQIGRIIFANYSLAKEQELNASDIDLPFLKVCSDEKILDFDEADTFTPLMVACYL
CCHHHHHHCHHEEECCCCCHHCCCCCCCCCCCHHHHCCCCCEECCCCCCCHHHHHHHHHH
GQVENVKWLIEHGANIDQQQSHSGHCPLSLTLKGYSLAKDTQKYIDIIQLLIKNQVNLLV
CCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEE
HDRSDKTFLHNAALVLNNLDFQSVVKFLIGQNPIDINEYFTYIDENDFDIVMHCYNNKLF
ECCCCCCHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHHEEEECCCCCEEEEEECCCHHH
DKALVLLAFYPDYFKRNYMSDNEGHNQFNINAFRKAIKDFNANERSILLMQLRQSGLHLS
HHHHHHHHHCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCC
EDLLEQLGIMDSSITLESKFF
HHHHHHHCCCCCCEEECCCCC
>Mature Secondary Structure
MQNRAKNNLIEYNGSLMIILYDFLQESSVMPRSKNDSKLKKKSALQSKFKEQQLNHGSKE
CCCCCCCCEEEECCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
HKSKFKFSQRKAKKKGPGMTHLPGNIYTLFTPVNGPESNHELIATSKIMVDLHIDNMSGN
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCC
DYIPSAIDRTDLVIVQPVHLLRKTGGRGLFAREDIPKGTCIGIYTGEVYSEQEFEQYLME
CCCCCCCCCCCEEEECCHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHH
HVGSDKSYAMYVGGRVVDAARKGNLTRYINFSDSQDNAEFVEGTLNRKKVVKVITTKNIK
HCCCCCCEEEEECCEEEEHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCCC
TGQQLLINYNTYEEQASRYYYFLNPGDGWLSAQEFYQTHQSQYRLEQMPYNLEGFDLKAG
CCCEEEEECCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCC
DRVLMTQIGRIIFANYSLAKEQELNASDIDLPFLKVCSDEKILDFDEADTFTPLMVACYL
CCHHHHHHCHHEEECCCCCHHCCCCCCCCCCCHHHHCCCCCEECCCCCCCHHHHHHHHHH
GQVENVKWLIEHGANIDQQQSHSGHCPLSLTLKGYSLAKDTQKYIDIIQLLIKNQVNLLV
CCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEE
HDRSDKTFLHNAALVLNNLDFQSVVKFLIGQNPIDINEYFTYIDENDFDIVMHCYNNKLF
ECCCCCCHHHHHHHEEECCCHHHHHHHHHCCCCCCHHHHEEEECCCCCEEEEEECCCHHH
DKALVLLAFYPDYFKRNYMSDNEGHNQFNINAFRKAIKDFNANERSILLMQLRQSGLHLS
HHHHHHHHHCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCC
EDLLEQLGIMDSSITLESKFF
HHHHHHHCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA