Click here to switch to the map view.

The map label for this gene is 54294593

Identifier: 54294593

GI number: 54294593

Start: 1863662

End: 1864027

Strand: Reverse

Name: 54294593

Synonym: lpl1669

Alternate gene names: NA

Gene position: 1864027-1863662 (Counterclockwise)

Preceding gene: 54294594

Following gene: 54294587

Centisome position: 55.71

GC content: 34.43

Gene sequence:

>366_bases
ATGAAAAGGAATGCATTGATTATAATGTTAGTTTATTTAACAAGTAATCCAGTTTTTGCTAAAAATTTAGGAAAATATAC
TTACGAAATTGCCTGTAAAAATTGCCATGCTCCTAATTTAGCCAAGGCTATAAAAGCCCCTCCAGCTTTTGATAAAAAGG
CATGGAAGCTGAGATTTAAACAAGCAAAAATAGAAGCAAAAAATAATCCTTCACAATTTGAAAGTGCAATGGATTACCTG
CTGTACAATGTCAAAGTGGGTAAAGGGTTGATGCATCATGGCGGTTTATGTAAAGAGGCAGATGTCCCTAATACCGATTG
TTCTGATGAGGCATTAATCGCAGCGATTAATTACATGCGAAAATAA

Upstream 100 bases:

>100_bases
TGGTCTATACGCTTTAATTAAAAAGTAAAAAACTATTTCAATTGGCAAAATATCTCATATAATCCTAAGATTGCTTCAGC
AATAATAATTTGGGGATGTG

Downstream 100 bases:

>100_bases
GATAAAATATTTAAATACATACCAGCTTTTGGCTGAGTTTCATTTGTAAATAACCTATTGTTTCCTTTCAATTAATATTC
AGCAACATAATCCCAATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MKRNALIIMLVYLTSNPVFAKNLGKYTYEIACKNCHAPNLAKAIKAPPAFDKKAWKLRFKQAKIEAKNNPSQFESAMDYL
LYNVKVGKGLMHHGGLCKEADVPNTDCSDEALIAAINYMRK

Sequences:

>Translated_121_residues
MKRNALIIMLVYLTSNPVFAKNLGKYTYEIACKNCHAPNLAKAIKAPPAFDKKAWKLRFKQAKIEAKNNPSQFESAMDYL
LYNVKVGKGLMHHGGLCKEADVPNTDCSDEALIAAINYMRK
>Mature_121_residues
MKRNALIIMLVYLTSNPVFAKNLGKYTYEIACKNCHAPNLAKAIKAPPAFDKKAWKLRFKQAKIEAKNNPSQFESAMDYL
LYNVKVGKGLMHHGGLCKEADVPNTDCSDEALIAAINYMRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13579; Mature: 13579

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNALIIMLVYLTSNPVFAKNLGKYTYEIACKNCHAPNLAKAIKAPPAFDKKAWKLRFK
CCCCEEEEEEEEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHH
QAKIEAKNNPSQFESAMDYLLYNVKVGKGLMHHGGLCKEADVPNTDCSDEALIAAINYMR
HHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MKRNALIIMLVYLTSNPVFAKNLGKYTYEIACKNCHAPNLAKAIKAPPAFDKKAWKLRFK
CCCCEEEEEEEEECCCCHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHH
QAKIEAKNNPSQFESAMDYLLYNVKVGKGLMHHGGLCKEADVPNTDCSDEALIAAINYMR
HHEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA