Click here to switch to the map view.

The map label for this gene is 54294458

Identifier: 54294458

GI number: 54294458

Start: 1701690

End: 1702232

Strand: Direct

Name: 54294458

Synonym: lpl1527

Alternate gene names: NA

Gene position: 1701690-1702232 (Clockwise)

Preceding gene: 54294457

Following gene: 54294459

Centisome position: 50.86

GC content: 31.12

Gene sequence:

>543_bases
GTGACAAACGTGAGTTTCGATTTTATAAAATCAATATGGATTGCAGCTCTTATAGGTATAACACCAACCTTGTCTTATTC
AGAGTCCAATATCCAGTATCAAGAAACACTTCAATCACATTGCTTTGAAACCTGGATGAAAAAAATAGATCCATCAATTG
ACAAAGAAACATATAAACAATTTGGAGATAAATATTGTCGATGCATTTCAACTAAAAATCTCGATAATAAAACAGGGGTT
CAAAAAGCAATTAGAAATTGCATACCACAAACAATTTTACATGATGCCATGGATGAACTGGAGGAAGAGGTGACTTTATC
AGAAGTAACGACACAAACAATCGAACAATATTGTCTTAATAGATGGAGCCTTATTTATCCCAATCAAAGTGATGAAGATA
AAAAAACAATTCAGGCCTATTGTGCGTGTGTCAAAACAAAATTATTAAGTTTTATAGAGCAAATAGAAAAAATATCAAAC
AGGGAATACAATGAAGCCATTAATGATATTAATACGATTTGCTCGGAAAATTTAAATCAATAA

Upstream 100 bases:

>100_bases
GAAGAAAAAAAGCGGCTATTTTTGGTTTAATGGAAAACCAAGGGATTGGTAGCCAGTTAAATTTCAGTTATTCTCAGCTA
TGAAATAAAGCATCAAAGGA

Downstream 100 bases:

>100_bases
CAGAGTATAATATAATTAAATGTCGACTAAATTAATACACACATTTAGCACCAGCAAGTTCTAATCCTTTTATGAAAGGC
CTATTCATGTCAAGTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTNVSFDFIKSIWIAALIGITPTLSYSESNIQYQETLQSHCFETWMKKIDPSIDKETYKQFGDKYCRCISTKNLDNKTGV
QKAIRNCIPQTILHDAMDELEEEVTLSEVTTQTIEQYCLNRWSLIYPNQSDEDKKTIQAYCACVKTKLLSFIEQIEKISN
REYNEAINDINTICSENLNQ

Sequences:

>Translated_180_residues
MTNVSFDFIKSIWIAALIGITPTLSYSESNIQYQETLQSHCFETWMKKIDPSIDKETYKQFGDKYCRCISTKNLDNKTGV
QKAIRNCIPQTILHDAMDELEEEVTLSEVTTQTIEQYCLNRWSLIYPNQSDEDKKTIQAYCACVKTKLLSFIEQIEKISN
REYNEAINDINTICSENLNQ
>Mature_179_residues
TNVSFDFIKSIWIAALIGITPTLSYSESNIQYQETLQSHCFETWMKKIDPSIDKETYKQFGDKYCRCISTKNLDNKTGVQ
KAIRNCIPQTILHDAMDELEEEVTLSEVTTQTIEQYCLNRWSLIYPNQSDEDKKTIQAYCACVKTKLLSFIEQIEKISNR
EYNEAINDINTICSENLNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20892; Mature: 20761

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVSFDFIKSIWIAALIGITPTLSYSESNIQYQETLQSHCFETWMKKIDPSIDKETYKQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGDKYCRCISTKNLDNKTGVQKAIRNCIPQTILHDAMDELEEEVTLSEVTTQTIEQYCLN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWSLIYPNQSDEDKKTIQAYCACVKTKLLSFIEQIEKISNREYNEAINDINTICSENLNQ
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNVSFDFIKSIWIAALIGITPTLSYSESNIQYQETLQSHCFETWMKKIDPSIDKETYKQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
FGDKYCRCISTKNLDNKTGVQKAIRNCIPQTILHDAMDELEEEVTLSEVTTQTIEQYCLN
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWSLIYPNQSDEDKKTIQAYCACVKTKLLSFIEQIEKISNREYNEAINDINTICSENLNQ
CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA