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The map label for this gene is 54294446

Identifier: 54294446

GI number: 54294446

Start: 1687707

End: 1687970

Strand: Reverse

Name: 54294446

Synonym: lpl1515

Alternate gene names: NA

Gene position: 1687970-1687707 (Counterclockwise)

Preceding gene: 54294447

Following gene: 54294445

Centisome position: 50.45

GC content: 31.06

Gene sequence:

>264_bases
ATGACAAAAACGACTTTAATAGAATTCCCTTGTTATTTTCCTATAAAAATTATCGGAATTAACTCAGAATTATTACTCAA
TGAAATCAGGCAAATTGTTATTAATCACTTCCCTACTTTTGAAAATGAGCATTTAACTCATAAAACGAGTGAACAAAACA
AGTACTTGGCTATTACTGTGACGGTGTATGCAGAAAATCAAATCTCGCTGGATGGATTATATCAGGATTTAAGTCAACAT
CCTGCTGTGAAAATGGTTTTATAA

Upstream 100 bases:

>100_bases
CCCTATTACAAAGATTAATGATTCTTTGATTAATGGCGGAAAAGTTGGCGAATATTGGCGGATAATTAATGATTCCTACC
AACAACTAGTAAACTAAATT

Downstream 100 bases:

>100_bases
TGATAATTCATAATTTAGGCATAAAAGATTATACTGAAATATGGGAGCAGATGAAGGAGTTCACTGCAGTCCGCGACAGC
AATTCTTATGATGAGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTKTTLIEFPCYFPIKIIGINSELLLNEIRQIVINHFPTFENEHLTHKTSEQNKYLAITVTVYAENQISLDGLYQDLSQH
PAVKMVL

Sequences:

>Translated_87_residues
MTKTTLIEFPCYFPIKIIGINSELLLNEIRQIVINHFPTFENEHLTHKTSEQNKYLAITVTVYAENQISLDGLYQDLSQH
PAVKMVL
>Mature_86_residues
TKTTLIEFPCYFPIKIIGINSELLLNEIRQIVINHFPTFENEHLTHKTSEQNKYLAITVTVYAENQISLDGLYQDLSQHP
AVKMVL

Specific function: Unknown

COG id: COG2921

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0250 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007454 [H]

Pfam domain/function: PF04359 DUF493 [H]

EC number: NA

Molecular weight: Translated: 10062; Mature: 9931

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTTLIEFPCYFPIKIIGINSELLLNEIRQIVINHFPTFENEHLTHKTSEQNKYLAITV
CCCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
TVYAENQISLDGLYQDLSQHPAVKMVL
EEEECCCCCHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
TKTTLIEFPCYFPIKIIGINSELLLNEIRQIVINHFPTFENEHLTHKTSEQNKYLAITV
CCCEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE
TVYAENQISLDGLYQDLSQHPAVKMVL
EEEECCCCCHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]