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The map label for this gene is 54294408

Identifier: 54294408

GI number: 54294408

Start: 1646076

End: 1646960

Strand: Direct

Name: 54294408

Synonym: lpl1477

Alternate gene names: NA

Gene position: 1646076-1646960 (Clockwise)

Preceding gene: 54294406

Following gene: 54294409

Centisome position: 49.2

GC content: 34.46

Gene sequence:

>885_bases
ATGGACGAGATCAAAAAAGATGATGAATTGAGTCAATGGCTTTCTACTTATGGAATAATCACCGCTGAACGTATATTAGG
TAGATACAACATATCACTGCCACAAGATGAAATACTAGAAGCGATTAACATTCCATCTAGTTTCTATAGGAATTTGTTAC
AGATTCCCTTAAAAAACGTACTTAATGGAATTGTAATTCAACAGGCAAGTGATTACCATGTCTATGCACAGAAACTGTTA
ATTGATTATTTGTTATCTGGTGAAAGCAGCAAAGAGCCTGACTCACAGGGGGCCGGAACTCGCGAATCACTTGAAGATGA
AAGACAGAGATTAGTTCAGTTAGGGGATGAGTTTCATAAATTGGAGTTAGAGCAGGATAATCTCATTGCATCAAGCCAAG
CCAGCTTAATGAAAATAAGCATTGACTGGAATACAAAACTGGAAACAACTCTTTCTAAATTAAATAACTTATACAAAAAT
ACAAATTCTAAAATTAAAAAAAATGCAATTAGAAAAGCGTTAATCAAGGCCTTTATTCATTGTGATCTAGTCAAGGATCA
ATCACAAAAAAACAAGTACCAGCTAATTGATAAATTGAATCAAACATTAGCTGTTTCTGTAGGTGCTGAATTAAAAGAGT
CTATCCTGAATAATCTGAGTGAACTCTTCCAAATTCTAGACGCTTTGAATAAAAAGCTTGATGAATTTACTGATCGGACT
AATCATCTAAGCCAACAGGCTAAATCATTCAGAGCCCAATTCTATGAGGTAATACTTCGCATCATTGAGTTAATTAAACT
ATTACCCGAATATAAAATTGACCCTCAACAAGATGCGATTAACCGAGAACCATTATACTTTGATAGAACGATTGGAGAGC
GCTAA

Upstream 100 bases:

>100_bases
TAAATCACTATCTAATCGTTTTAACATGATAAAATACACTATAATTTCAAATAAATAGCCCTTATATCACATACTTTAAA
GAATTTAAATTGGATAAAAA

Downstream 100 bases:

>100_bases
CGCAACCCCCTATTTTCTCTAAAATCATACTATAACTATTGACTGAATGGTTGAATGCATGAATTTTTATTAGCCAGACC
ACTATGAATTCATGTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDEIKKDDELSQWLSTYGIITAERILGRYNISLPQDEILEAINIPSSFYRNLLQIPLKNVLNGIVIQQASDYHVYAQKLL
IDYLLSGESSKEPDSQGAGTRESLEDERQRLVQLGDEFHKLELEQDNLIASSQASLMKISIDWNTKLETTLSKLNNLYKN
TNSKIKKNAIRKALIKAFIHCDLVKDQSQKNKYQLIDKLNQTLAVSVGAELKESILNNLSELFQILDALNKKLDEFTDRT
NHLSQQAKSFRAQFYEVILRIIELIKLLPEYKIDPQQDAINREPLYFDRTIGER

Sequences:

>Translated_294_residues
MDEIKKDDELSQWLSTYGIITAERILGRYNISLPQDEILEAINIPSSFYRNLLQIPLKNVLNGIVIQQASDYHVYAQKLL
IDYLLSGESSKEPDSQGAGTRESLEDERQRLVQLGDEFHKLELEQDNLIASSQASLMKISIDWNTKLETTLSKLNNLYKN
TNSKIKKNAIRKALIKAFIHCDLVKDQSQKNKYQLIDKLNQTLAVSVGAELKESILNNLSELFQILDALNKKLDEFTDRT
NHLSQQAKSFRAQFYEVILRIIELIKLLPEYKIDPQQDAINREPLYFDRTIGER
>Mature_294_residues
MDEIKKDDELSQWLSTYGIITAERILGRYNISLPQDEILEAINIPSSFYRNLLQIPLKNVLNGIVIQQASDYHVYAQKLL
IDYLLSGESSKEPDSQGAGTRESLEDERQRLVQLGDEFHKLELEQDNLIASSQASLMKISIDWNTKLETTLSKLNNLYKN
TNSKIKKNAIRKALIKAFIHCDLVKDQSQKNKYQLIDKLNQTLAVSVGAELKESILNNLSELFQILDALNKKLDEFTDRT
NHLSQQAKSFRAQFYEVILRIIELIKLLPEYKIDPQQDAINREPLYFDRTIGER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33915; Mature: 33915

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEIKKDDELSQWLSTYGIITAERILGRYNISLPQDEILEAINIPSSFYRNLLQIPLKNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LNGIVIQQASDYHVYAQKLLIDYLLSGESSKEPDSQGAGTRESLEDERQRLVQLGDEFHK
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LELEQDNLIASSQASLMKISIDWNTKLETTLSKLNNLYKNTNSKIKKNAIRKALIKAFIH
HCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CDLVKDQSQKNKYQLIDKLNQTLAVSVGAELKESILNNLSELFQILDALNKKLDEFTDRT
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHLSQQAKSFRAQFYEVILRIIELIKLLPEYKIDPQQDAINREPLYFDRTIGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MDEIKKDDELSQWLSTYGIITAERILGRYNISLPQDEILEAINIPSSFYRNLLQIPLKNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LNGIVIQQASDYHVYAQKLLIDYLLSGESSKEPDSQGAGTRESLEDERQRLVQLGDEFHK
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LELEQDNLIASSQASLMKISIDWNTKLETTLSKLNNLYKNTNSKIKKNAIRKALIKAFIH
HCCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
CDLVKDQSQKNKYQLIDKLNQTLAVSVGAELKESILNNLSELFQILDALNKKLDEFTDRT
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NHLSQQAKSFRAQFYEVILRIIELIKLLPEYKIDPQQDAINREPLYFDRTIGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA