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The map label for this gene is ygfY [C]

Identifier: 54294378

GI number: 54294378

Start: 1615999

End: 1616238

Strand: Direct

Name: ygfY [C]

Synonym: lpl1447

Alternate gene names: 54294378

Gene position: 1615999-1616238 (Clockwise)

Preceding gene: 54294376

Following gene: 54294379

Centisome position: 48.3

GC content: 35.42

Gene sequence:

>240_bases
GTGGACAATAGAGAAAAATCAAGGTTATTATGGAAATGCAGGCGAGGAATGCTAGAGCTTGATCTTGTTTTACAGAAATT
CATAGCCAATGAGATTGATCGACTTACAGAAAATCAATTGAAAGCATTTGATAATCTATTAACCCACAATGACCCTAATT
TATATGCCTGGTTAATGGGGCATGAGGAACCCGAAAAAGAGTTGCTTGAAATTGTATCATTCATCAGAAACTGTGATTAA

Upstream 100 bases:

>100_bases
ATACAGAGTAGTGTATCATTTGGCCTCTCAAAATCAGATATCATTATTGAATAATTAGGGTTATGTTGTATTTATCGTGA
AGTAACAGAGGAAATCCATT

Downstream 100 bases:

>100_bases
ACCAGGTAAATCCAAAGTATATCTTCGATTAATTGCGGTTCTTTATTTGTGCACCATTGGATTAGTTTTATATTCTTCTT
TACCTGTGTTGATAGAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDNREKSRLLWKCRRGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMGHEEPEKELLEIVSFIRNCD

Sequences:

>Translated_79_residues
MDNREKSRLLWKCRRGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMGHEEPEKELLEIVSFIRNCD
>Mature_79_residues
MDNREKSRLLWKCRRGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMGHEEPEKELLEIVSFIRNCD

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0350 family

Homologues:

Organism=Escherichia coli, GI1789264, Length=72, Percent_Identity=41.6666666666667, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1447_LEGPL (Q5WWK6)

Other databases:

- EMBL:   CR628337
- RefSeq:   YP_126793.1
- ProteinModelPortal:   Q5WWK6
- SMR:   Q5WWK6
- STRING:   Q5WWK6
- GeneID:   3114300
- GenomeReviews:   CR628337_GR
- KEGG:   lpf:lpl1447
- NMPDR:   fig|297245.3.peg.2745
- LegioList:   lpl1447
- eggNOG:   COG2938
- HOGENOM:   HBG730588
- OMA:   GHEEPEK
- PhylomeDB:   Q5WWK6
- ProtClustDB:   CLSK834526
- BioCyc:   LPNE297245:LPL1447-MONOMER
- InterPro:   IPR005631
- Gene3D:   G3DSA:1.10.150.250

Pfam domain/function: PF03937 DUF339; SSF109910 DUF339

EC number: NA

Molecular weight: Translated: 9488; Mature: 9488

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNREKSRLLWKCRRGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMG
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
HEEPEKELLEIVSFIRNCD
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNREKSRLLWKCRRGMLELDLVLQKFIANEIDRLTENQLKAFDNLLTHNDPNLYAWLMG
CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
HEEPEKELLEIVSFIRNCD
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA