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The map label for this gene is skgA [H]

Identifier: 54294345

GI number: 54294345

Start: 1577102

End: 1578049

Strand: Direct

Name: skgA [H]

Synonym: lpl1413

Alternate gene names: 54294345

Gene position: 1577102-1578049 (Clockwise)

Preceding gene: 54294344

Following gene: 54294346

Centisome position: 47.14

GC content: 37.97

Gene sequence:

>948_bases
ATGACACAATGGTTCGTAAAAGATTTAAGCCAATTAACTGGTGTATCAGTACAAACGTTACATCACTATGACCGTATAGG
ATTGCTAAAGCCTTCATTACGACTTGCCAATGGGTACCGTGTTTACTCTGAGAAGGATTTATTGAAATTACAACAGATTA
TTGCTTTGAAGTTTTTCGGTTTTGAGTTGTCACAAATCAAAACCTTACTCGCAGAAGAAGGTAATGCGCTCAATCATTTT
AACAGCCAAGCTCGGGTGTTAGAACAAAAAGCATCCACTTTACTTGAGGGAGCTAAAACTTTGAGACGCATCATTGACTC
TGTTGACAAAAATCAATCTATCCCATGGGAAACCATTATTCAACTGATAGAGGTATATAAAATGACAGAACATCTTGAGC
ATGGCTGGGTAAAGGAAATATTCACGCCGGATGAATTAAAACAGTACGCTGAGTTTGAAAAAGAAATGAAAGCCAATGCT
ACGCCTGAGCAAAAAGCGGCTATGGAAAACAATTGGTCTCAGCTAGTTGATGAGGTAAAAAATAATCTGAAGCAAGATCC
AGATTCAAAAATAGGAATTTATTTAGGAAAAAAGATAATGGATTGGGTTAATGGGGTATACGGTAAAAAATACGCTCATT
TAAGGACCAAAAAATTTGAACAGGGTTTTGGGGAAGGAAAAGGTCTTGATGAGGTTGGATTAACACCACAAATCGTATCC
TGGATGGATAAAGCGATGGATGCTTACTGGAGAGACCGAATCTATGGGATTCTTGATCAAATAGGAAAAGCTCCTTCAGC
AAGTGTATTAGCTCTTTGGAATGAAATGCTGATTGATATGTATGGTGAGGAAACGTCACGTAAAAATGCCATATATGAAA
TCGCCTTAAATGACGAGGAGGTTAGCCCTGAGGCGAAAGCTTGGCTTAGAAATGTTTTAGATTCCTAA

Upstream 100 bases:

>100_bases
CTCTTGGCAGGTTAGAAAAATAATGATTCAAGAAATTTTAAAAACTGCTTGACCCTATTGTTGCTATAGGCATTACCTTT
GTCTTGAAAGGGGAAACACA

Downstream 100 bases:

>100_bases
AAATATCAATAACACTGTTGGATCGGTATTGTTTTACCGATCCATTCAACTCGATTTGAGACCTTCAATTATTAATTGAT
TTAGCATCTTAGGCAGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Stationary-phase regulation of katG protein [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTQWFVKDLSQLTGVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHF
NSQARVLEQKASTLLEGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANA
TPEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
WMDKAMDAYWRDRIYGILDQIGKAPSASVLALWNEMLIDMYGEETSRKNAIYEIALNDEEVSPEAKAWLRNVLDS

Sequences:

>Translated_315_residues
MTQWFVKDLSQLTGVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHF
NSQARVLEQKASTLLEGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANA
TPEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
WMDKAMDAYWRDRIYGILDQIGKAPSASVLALWNEMLIDMYGEETSRKNAIYEIALNDEEVSPEAKAWLRNVLDS
>Mature_314_residues
TQWFVKDLSQLTGVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFGFELSQIKTLLAEEGNALNHFN
SQARVLEQKASTLLEGAKTLRRIIDSVDKNQSIPWETIIQLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANAT
PEQKAAMENNWSQLVDEVKNNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVSW
MDKAMDAYWRDRIYGILDQIGKAPSASVLALWNEMLIDMYGEETSRKNAIYEIALNDEEVSPEAKAWLRNVLDS

Specific function: Regulates the induction of katG (catalase-peroxidase) in stationary phase [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR012925 [H]

Pfam domain/function: PF00376 MerR; PF07739 TipAS [H]

EC number: NA

Molecular weight: Translated: 36234; Mature: 36103

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQWFVKDLSQLTGVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFG
CCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHC
FELSQIKTLLAEEGNALNHFNSQARVLEQKASTLLEGAKTLRRIIDSVDKNQSIPWETII
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANATPEQKAAMENNWSQLVDEVK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH
NNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
WMDKAMDAYWRDRIYGILDQIGKAPSASVLALWNEMLIDMYGEETSRKNAIYEIALNDEE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VSPEAKAWLRNVLDS
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
TQWFVKDLSQLTGVSVQTLHHYDRIGLLKPSLRLANGYRVYSEKDLLKLQQIIALKFFG
CHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHC
FELSQIKTLLAEEGNALNHFNSQARVLEQKASTLLEGAKTLRRIIDSVDKNQSIPWETII
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QLIEVYKMTEHLEHGWVKEIFTPDELKQYAEFEKEMKANATPEQKAAMENNWSQLVDEVK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHH
NNLKQDPDSKIGIYLGKKIMDWVNGVYGKKYAHLRTKKFEQGFGEGKGLDEVGLTPQIVS
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
WMDKAMDAYWRDRIYGILDQIGKAPSASVLALWNEMLIDMYGEETSRKNAIYEIALNDEE
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
VSPEAKAWLRNVLDS
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10498730 [H]