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The map label for this gene is 54294295

Identifier: 54294295

GI number: 54294295

Start: 1516784

End: 1517554

Strand: Reverse

Name: 54294295

Synonym: lpl1360

Alternate gene names: NA

Gene position: 1517554-1516784 (Counterclockwise)

Preceding gene: 54294299

Following gene: 54294293

Centisome position: 45.36

GC content: 39.82

Gene sequence:

>771_bases
ATGACAATACTTGTTTTTGATATCGAAACAATTCCAGATATTGAGTCAGGGCGAAAGCTTTTCGCACTTGATGGCTTATC
AGATGAAGATACGGCATGCGCTATGTTTGCCTTAAGGCGTGAGAAAGCAGGCAATGATTTTTTGCCTCATTACTTACAAA
AAATCTGCGCTATATCAGTGGTAATCAGTCATGGAAATCAAATAAAAGTATGGTCTCTTGGCGATGAAAATTCTGATGAA
AAAGAATTAATAACCCGTTTTTTTGCTGGAATTGACAAACATACACCCACCCTGGTGAGCTGGAATGGGAGCGGTTTTGA
TCTTCCTGTACTGCATTACCGATCACTATACCATAGTATTAGCGCGCCCACTTATTGGGAGACAGGGGAAAATCAACAAA
CCTTCAAATGGAACAATTATCTAAGCCGTTTTCACTACCGACATATTGATCTCATGGACGTCCTTGCCGGATATCAGAAC
AGAGCATTTGCCCCTCTTGATGACATTTCAACCATGCTAGGTTTCCCTGGAAAAATGGGAATGAGTGGCTCTAAAGTTTG
GGAACAATACCAGGCAGGCCAATTGAAAGAAATAAGAGATTATTGTGAAACAGACGTACTCAACACCTATTGCGTGTATT
TAAGATTTGAGCTGATGCGTGGCACAATTAGCCAGGAAGGTTATGACAGAAACATAACACAACTCAAAAACTATTTAGGT
GCTGAGAAAGACAAGATGCATTTACAGGAATTTCTCAAAAAAATGATCTGA

Upstream 100 bases:

>100_bases
TCAGATATCCCAATTGTGATTTTGACAAATCCGAGACTTGTCGATAGTTTCAAGCAAATTTGCAAAAATAAGAATTAAGA
CCGAACTGGACTAACAAATT

Downstream 100 bases:

>100_bases
AGATCTTAATCGTCACTGTAAACGAGTTGTCTACTCTAGATAATGGCGACCGCTAAAAAAGTCTCTGCCCAGTAAAAGTA
AGGCTATGACTATCTGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTILVFDIETIPDIESGRKLFALDGLSDEDTACAMFALRREKAGNDFLPHYLQKICAISVVISHGNQIKVWSLGDENSDE
KELITRFFAGIDKHTPTLVSWNGSGFDLPVLHYRSLYHSISAPTYWETGENQQTFKWNNYLSRFHYRHIDLMDVLAGYQN
RAFAPLDDISTMLGFPGKMGMSGSKVWEQYQAGQLKEIRDYCETDVLNTYCVYLRFELMRGTISQEGYDRNITQLKNYLG
AEKDKMHLQEFLKKMI

Sequences:

>Translated_256_residues
MTILVFDIETIPDIESGRKLFALDGLSDEDTACAMFALRREKAGNDFLPHYLQKICAISVVISHGNQIKVWSLGDENSDE
KELITRFFAGIDKHTPTLVSWNGSGFDLPVLHYRSLYHSISAPTYWETGENQQTFKWNNYLSRFHYRHIDLMDVLAGYQN
RAFAPLDDISTMLGFPGKMGMSGSKVWEQYQAGQLKEIRDYCETDVLNTYCVYLRFELMRGTISQEGYDRNITQLKNYLG
AEKDKMHLQEFLKKMI
>Mature_255_residues
TILVFDIETIPDIESGRKLFALDGLSDEDTACAMFALRREKAGNDFLPHYLQKICAISVVISHGNQIKVWSLGDENSDEK
ELITRFFAGIDKHTPTLVSWNGSGFDLPVLHYRSLYHSISAPTYWETGENQQTFKWNNYLSRFHYRHIDLMDVLAGYQNR
AFAPLDDISTMLGFPGKMGMSGSKVWEQYQAGQLKEIRDYCETDVLNTYCVYLRFELMRGTISQEGYDRNITQLKNYLGA
EKDKMHLQEFLKKMI

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29570; Mature: 29439

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILVFDIETIPDIESGRKLFALDGLSDEDTACAMFALRREKAGNDFLPHYLQKICAISV
CEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VISHGNQIKVWSLGDENSDEKELITRFFAGIDKHTPTLVSWNGSGFDLPVLHYRSLYHSI
HEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHC
SAPTYWETGENQQTFKWNNYLSRFHYRHIDLMDVLAGYQNRAFAPLDDISTMLGFPGKMG
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
MSGSKVWEQYQAGQLKEIRDYCETDVLNTYCVYLRFELMRGTISQEGYDRNITQLKNYLG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
AEKDKMHLQEFLKKMI
CCHHHHHHHHHHHHHC
>Mature Secondary Structure 
TILVFDIETIPDIESGRKLFALDGLSDEDTACAMFALRREKAGNDFLPHYLQKICAISV
EEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VISHGNQIKVWSLGDENSDEKELITRFFAGIDKHTPTLVSWNGSGFDLPVLHYRSLYHSI
HEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHC
SAPTYWETGENQQTFKWNNYLSRFHYRHIDLMDVLAGYQNRAFAPLDDISTMLGFPGKMG
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
MSGSKVWEQYQAGQLKEIRDYCETDVLNTYCVYLRFELMRGTISQEGYDRNITQLKNYLG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
AEKDKMHLQEFLKKMI
CCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA