Click here to switch to the map view.

The map label for this gene is 54294273

Identifier: 54294273

GI number: 54294273

Start: 1495533

End: 1496942

Strand: Direct

Name: 54294273

Synonym: lpl1338

Alternate gene names: NA

Gene position: 1495533-1496942 (Clockwise)

Preceding gene: 54294272

Following gene: 54294276

Centisome position: 44.7

GC content: 35.6

Gene sequence:

>1410_bases
ATGATTGAAGTAAATATCTGGATGTCAACCGCGCTTTTGTTTAAGAAACGAATTAAGCATAAATTTTTTGGCCCGCTTTT
AGCTTCAGAGGATAAAGGGGAAAATGTAGGACACGTTAATTTTACTATAGAAATTGATGAGCGCACAAAAACAAAAAATA
GTTTTGATTTTATTGAGCAACATGGGTCAGAATTACGAGCTAAAAAAACATTGCGTGTCGTACCAACTAAAGCGACCACC
ACATCTCCTCCAAACATAGAATCATCTCATCTGATACCAACTATAGTAAAAAGTGATATCGTTTCTCATAGTTTTTGGCC
AGATGGGAGACCCTCTAAATCAGAAGCTATTAAAGGCAAAGCCGTCAAGCCCCAGTTTAAAACTCATGAAGAAGATATGA
TTGCTGAAGATTCGATCACAGCAATGACTATTACGCATCGCAAATCTGCTTTAGCTGAGATTGATAAGGAAAAGATGGAA
ATTCTTGATTTCCTTGTTGAAATTTCAGATTTGGAAGTCAGCTTAGAGCAAAGATCACTTTTTGTGGATGATCTCAAAAA
ATTACAGTTGGGAAAAGATGAGTTGATTAAGCAACAGAAGCAATTAACCAATTCTCACCAAACGCAGTTAAAAGATTTAA
AGGGGCAATTAGCTAAGCTGGAACTTCATTTGAATAAAACAAATAGCCAAATCACAGCTACAGAGAGAACTTTAAATTAC
TTGAATAAATTGGAAAAGCCCGACCCTAAAACTAAAGAGCAATTGATTGAACTTACTGAAAAATTAGTTAAATTAAAAAA
AGAGCGCGAGACCACAATAAGTTCTCAACATGAGATAAACGAATTGATATTAAAATCTGGACTGACTTATCATGAGGACA
TGCAAAAAATTGAAAAGAAACTGCAACAGATTAAGCTTGCAATGAACCATCGTATAGAAGATTTGAAAAATCTGGATATT
AAAATCAATGGCAGGGATGAGAATGATTTAAAAGAGTTGCAAGAAGAGGGGCGTCGTCGTAAAGAATATACTTCTCGTAA
AGAGAGATTCATCAAAAGCCGAGATTTTACAGAAGGAAGGCAACCTGATTACAGCGTTACTTTGCCAACCGCAGAAAGCG
GTTTTACTTATTATGTTGATGAAGTCAAAATACTAAAAGCGATGCAAGAAGAACGCAGCCAAAACTATTCCTTTCTTTTT
AATAACTGTGCCAGTAGTGCAAAACGTTGTTTGCTAGCAGGAATAGATGAAAAATTACGAGCCAAATTAAAAGAAACGGG
TTTAGATAGCAAATTTTTTGAAATTAGCAAAGTGGAAACATGCAAGTCATTACGTGATTGGGCAAGAACTCTTGATAGTA
AATTGACGGAACTTAATTTTCCATCGCCTGTTCCTACCCGAGGTGCTTAA

Upstream 100 bases:

>100_bases
TAATGTGCCATAATTGATAGTTGTGTAGTATAATTGAAACTAATGGTAAAATATTTGTCATTAGTGGTTTATACACATTA
CTGTTAGAAGAAGTATTATT

Downstream 100 bases:

>100_bases
GAAATAATAAGCAGTTCGTCCGTAAAAAAGCTAAGATCACTGCCTTGAGTTTCAGGCAGTGATTTTTTTATAAATCATCC
TCATCACCAATACTAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MIEVNIWMSTALLFKKRIKHKFFGPLLASEDKGENVGHVNFTIEIDERTKTKNSFDFIEQHGSELRAKKTLRVVPTKATT
TSPPNIESSHLIPTIVKSDIVSHSFWPDGRPSKSEAIKGKAVKPQFKTHEEDMIAEDSITAMTITHRKSALAEIDKEKME
ILDFLVEISDLEVSLEQRSLFVDDLKKLQLGKDELIKQQKQLTNSHQTQLKDLKGQLAKLELHLNKTNSQITATERTLNY
LNKLEKPDPKTKEQLIELTEKLVKLKKERETTISSQHEINELILKSGLTYHEDMQKIEKKLQQIKLAMNHRIEDLKNLDI
KINGRDENDLKELQEEGRRRKEYTSRKERFIKSRDFTEGRQPDYSVTLPTAESGFTYYVDEVKILKAMQEERSQNYSFLF
NNCASSAKRCLLAGIDEKLRAKLKETGLDSKFFEISKVETCKSLRDWARTLDSKLTELNFPSPVPTRGA

Sequences:

>Translated_469_residues
MIEVNIWMSTALLFKKRIKHKFFGPLLASEDKGENVGHVNFTIEIDERTKTKNSFDFIEQHGSELRAKKTLRVVPTKATT
TSPPNIESSHLIPTIVKSDIVSHSFWPDGRPSKSEAIKGKAVKPQFKTHEEDMIAEDSITAMTITHRKSALAEIDKEKME
ILDFLVEISDLEVSLEQRSLFVDDLKKLQLGKDELIKQQKQLTNSHQTQLKDLKGQLAKLELHLNKTNSQITATERTLNY
LNKLEKPDPKTKEQLIELTEKLVKLKKERETTISSQHEINELILKSGLTYHEDMQKIEKKLQQIKLAMNHRIEDLKNLDI
KINGRDENDLKELQEEGRRRKEYTSRKERFIKSRDFTEGRQPDYSVTLPTAESGFTYYVDEVKILKAMQEERSQNYSFLF
NNCASSAKRCLLAGIDEKLRAKLKETGLDSKFFEISKVETCKSLRDWARTLDSKLTELNFPSPVPTRGA
>Mature_469_residues
MIEVNIWMSTALLFKKRIKHKFFGPLLASEDKGENVGHVNFTIEIDERTKTKNSFDFIEQHGSELRAKKTLRVVPTKATT
TSPPNIESSHLIPTIVKSDIVSHSFWPDGRPSKSEAIKGKAVKPQFKTHEEDMIAEDSITAMTITHRKSALAEIDKEKME
ILDFLVEISDLEVSLEQRSLFVDDLKKLQLGKDELIKQQKQLTNSHQTQLKDLKGQLAKLELHLNKTNSQITATERTLNY
LNKLEKPDPKTKEQLIELTEKLVKLKKERETTISSQHEINELILKSGLTYHEDMQKIEKKLQQIKLAMNHRIEDLKNLDI
KINGRDENDLKELQEEGRRRKEYTSRKERFIKSRDFTEGRQPDYSVTLPTAESGFTYYVDEVKILKAMQEERSQNYSFLF
NNCASSAKRCLLAGIDEKLRAKLKETGLDSKFFEISKVETCKSLRDWARTLDSKLTELNFPSPVPTRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54103; Mature: 54103

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVNIWMSTALLFKKRIKHKFFGPLLASEDKGENVGHVNFTIEIDERTKTKNSFDFIEQ
CEEEEEHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH
HGSELRAKKTLRVVPTKATTTSPPNIESSHLIPTIVKSDIVSHSFWPDGRPSKSEAIKGK
HCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
AVKPQFKTHEEDMIAEDSITAMTITHRKSALAEIDKEKMEILDFLVEISDLEVSLEQRSL
CCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVDDLKKLQLGKDELIKQQKQLTNSHQTQLKDLKGQLAKLELHLNKTNSQITATERTLNY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEHHHHHHHHH
LNKLEKPDPKTKEQLIELTEKLVKLKKERETTISSQHEINELILKSGLTYHEDMQKIEKK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQQIKLAMNHRIEDLKNLDIKINGRDENDLKELQEEGRRRKEYTSRKERFIKSRDFTEGR
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QPDYSVTLPTAESGFTYYVDEVKILKAMQEERSQNYSFLFNNCASSAKRCLLAGIDEKLR
CCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
AKLKETGLDSKFFEISKVETCKSLRDWARTLDSKLTELNFPSPVPTRGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIEVNIWMSTALLFKKRIKHKFFGPLLASEDKGENVGHVNFTIEIDERTKTKNSFDFIEQ
CEEEEEHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH
HGSELRAKKTLRVVPTKATTTSPPNIESSHLIPTIVKSDIVSHSFWPDGRPSKSEAIKGK
HCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
AVKPQFKTHEEDMIAEDSITAMTITHRKSALAEIDKEKMEILDFLVEISDLEVSLEQRSL
CCCCCCCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVDDLKKLQLGKDELIKQQKQLTNSHQTQLKDLKGQLAKLELHLNKTNSQITATERTLNY
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEHHHHHHHHH
LNKLEKPDPKTKEQLIELTEKLVKLKKERETTISSQHEINELILKSGLTYHEDMQKIEKK
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LQQIKLAMNHRIEDLKNLDIKINGRDENDLKELQEEGRRRKEYTSRKERFIKSRDFTEGR
HHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QPDYSVTLPTAESGFTYYVDEVKILKAMQEERSQNYSFLFNNCASSAKRCLLAGIDEKLR
CCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
AKLKETGLDSKFFEISKVETCKSLRDWARTLDSKLTELNFPSPVPTRGA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA