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The map label for this gene is ybeB [H]

Identifier: 54294263

GI number: 54294263

Start: 1485400

End: 1485738

Strand: Reverse

Name: ybeB [H]

Synonym: lpl1328

Alternate gene names: 54294263

Gene position: 1485738-1485400 (Counterclockwise)

Preceding gene: 54294264

Following gene: 54294262

Centisome position: 44.41

GC content: 38.64

Gene sequence:

>339_bases
ATGCTTGAAAAAAATCCTACGCTCGAAAAACTGTTAAAATCTCTTGAAGACATTCAAGCGATAGATATTAAGATCATTGA
TGTGCATAAGCAAACAACAATCACTGATTTTATGGTCGTCACATCAGGCCGTTCATCCAGACATGTCAAATCGATAGCTC
AAAAAGTTCTGGAAGATATGAAGGTTGCTGGTCTGCCTTGCTTGAGTTCTACTGGAATAGAACATGGTGATTGGGCTTTA
ATTGATTTTGGCGACATCATATTGCATGTCATGCAACCAGAATTCCGACATTTTTATAACCTTGAAGGATTATGGGAAGA
ACACCCAGGTAACTCCTGA

Upstream 100 bases:

>100_bases
ATTTTTACGTTTTAGTTTTCAAGTCTTGAAAACTAAAACCCTTTTTATAAAAATCAATTGTTGATATTATTCAACCTTTT
TGACGGAATATATCTTAGTT

Downstream 100 bases:

>100_bases
CATTATCTATGCTAAAAATTACCATTATCACTCTTGGCAATAAAATGCCTGACTGGGTTAACTCCGGAGTTAATGAATAC
GCAAAGAGGTTTCATGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MLEKNPTLEKLLKSLEDIQAIDIKIIDVHKQTTITDFMVVTSGRSSRHVKSIAQKVLEDMKVAGLPCLSSTGIEHGDWAL
IDFGDIILHVMQPEFRHFYNLEGLWEEHPGNS

Sequences:

>Translated_112_residues
MLEKNPTLEKLLKSLEDIQAIDIKIIDVHKQTTITDFMVVTSGRSSRHVKSIAQKVLEDMKVAGLPCLSSTGIEHGDWAL
IDFGDIILHVMQPEFRHFYNLEGLWEEHPGNS
>Mature_112_residues
MLEKNPTLEKLLKSLEDIQAIDIKIIDVHKQTTITDFMVVTSGRSSRHVKSIAQKVLEDMKVAGLPCLSSTGIEHGDWAL
IDFGDIILHVMQPEFRHFYNLEGLWEEHPGNS

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=101, Percent_Identity=33.6633663366337, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081768, Length=95, Percent_Identity=43.1578947368421, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12697; Mature: 12697

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKNPTLEKLLKSLEDIQAIDIKIIDVHKQTTITDFMVVTSGRSSRHVKSIAQKVLEDM
CCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHH
KVAGLPCLSSTGIEHGDWALIDFGDIILHVMQPEFRHFYNLEGLWEEHPGNS
HHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEKNPTLEKLLKSLEDIQAIDIKIIDVHKQTTITDFMVVTSGRSSRHVKSIAQKVLEDM
CCCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHH
KVAGLPCLSSTGIEHGDWALIDFGDIILHVMQPEFRHFYNLEGLWEEHPGNS
HHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]