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The map label for this gene is trpF [H]

Identifier: 54294201

GI number: 54294201

Start: 1408576

End: 1409199

Strand: Direct

Name: trpF [H]

Synonym: lpl1266

Alternate gene names: 54294201

Gene position: 1408576-1409199 (Clockwise)

Preceding gene: 54294200

Following gene: 54294202

Centisome position: 42.1

GC content: 37.82

Gene sequence:

>624_bases
TTGAATCCATCTCGTATAAGAGTCAAAATGTGTGGAATGACACGTTCAGAAGATATTCAATACGCCATTGATTTAGGGGT
GGACGCCATTGGCTTAATATTTTATCCCAAAAGTGCGCGTAATGTCTCACTGGAAAAAGCCAGAATAATAGTCAATAATA
TACCTCCATTTGTTGATATTGTTGCAGTTTTGGTAAACCCAGAACAATCTTTTGTTCAACTGATTATTAATGAAATTCCT
GTGCAGTTATTGCAATTTCATGGTGAGGAATCTTCAGAGTTTTGCAGACAATTTAATAAGCCGTTTATCAAAGCGATTCA
TCCTAAGACAGCAATCCAAATCCAAAGTGCTGTTGATGAGTTTTTTGATGCCAGCGCTATATTGTTGGATACGCCATCAG
ACAAGGGACGAGGAGGAACGGGATTAACTTTTGACTGGAATATAATTCCTGAAAATTTATCCAAGCCTTACATATTGGCT
GGTGGTTTGAATGAATCTAACATTTTAGAGGCAATTACCATGTGTCATCCTTATGCAGTGGATGTGTGCAGTGGTATAGA
AGCTTCACCCGGAGTAAAAGATCATTTGAAAATGAGCCGATTTATAAAGGCAATATGGGGATAG

Upstream 100 bases:

>100_bases
TGCACCGTCATATGGCCTATATTTGGTCCAGGTGACTTATCCCAAAGAATTTGGATTGTTGCAAAATAATCCTGGCCCTT
TGTTTCTTTGGGAGAAATAA

Downstream 100 bases:

>100_bases
TATGATTAAAAAAGAGCTTCCAGATGAGTTTGGCCATTTTGGCCCATATGGCGGTATGTTTGTAGCCGATACATTAGTTC
ATGCTTTAAAACAATTAGAG

Product: N-(5'-phosphoribosyl)anthranilate isomerase

Products: NA

Alternate protein names: PRAI [H]

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNPSRIRVKMCGMTRSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDIVAVLVNPEQSFVQLIINEIP
VQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDEFFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILA
GGLNESNILEAITMCHPYAVDVCSGIEASPGVKDHLKMSRFIKAIWG

Sequences:

>Translated_207_residues
MNPSRIRVKMCGMTRSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDIVAVLVNPEQSFVQLIINEIP
VQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDEFFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILA
GGLNESNILEAITMCHPYAVDVCSGIEASPGVKDHLKMSRFIKAIWG
>Mature_207_residues
MNPSRIRVKMCGMTRSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDIVAVLVNPEQSFVQLIINEIP
VQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDEFFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILA
GGLNESNILEAITMCHPYAVDVCSGIEASPGVKDHLKMSRFIKAIWG

Specific function: Bifunctional Enzyme That Catalyzes Two Sequential Steps Of Tryptophan Biosynthetic Pathway. The First Reaction Is Catalyzed By The Isomerase, Coded By The Trpf Domain; The Second Reaction Is Catalyzed By The Synthase, Coded By The Trpc Domain. [C]

COG id: COG0135

COG function: function code E; Phosphoribosylanthranilate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpF family [H]

Homologues:

Organism=Escherichia coli, GI87081863, Length=189, Percent_Identity=30.6878306878307, Blast_Score=77, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320210, Length=216, Percent_Identity=31.0185185185185, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001240
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00697 PRAI [H]

EC number: =5.3.1.24 [H]

Molecular weight: Translated: 22932; Mature: 22932

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSRIRVKMCGMTRSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDI
CCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHEEEECCCCCHHHH
VAVLVNPEQSFVQLIINEIPVQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHH
FFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILAGGLNESNILEAITMCHPYAV
HHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCHHH
DVCSGIEASPGVKDHLKMSRFIKAIWG
HHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNPSRIRVKMCGMTRSEDIQYAIDLGVDAIGLIFYPKSARNVSLEKARIIVNNIPPFVDI
CCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHEEEECCCCCHHHH
VAVLVNPEQSFVQLIINEIPVQLLQFHGEESSEFCRQFNKPFIKAIHPKTAIQIQSAVDE
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHH
FFDASAILLDTPSDKGRGGTGLTFDWNIIPENLSKPYILAGGLNESNILEAITMCHPYAV
HHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCHHH
DVCSGIEASPGVKDHLKMSRFIKAIWG
HHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA