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The map label for this gene is 54294172

Identifier: 54294172

GI number: 54294172

Start: 1378253

End: 1379317

Strand: Direct

Name: 54294172

Synonym: lpl1236

Alternate gene names: NA

Gene position: 1378253-1379317 (Clockwise)

Preceding gene: 54294171

Following gene: 54294173

Centisome position: 41.19

GC content: 32.3

Gene sequence:

>1065_bases
ATGAAAATTTTTAAAGGATTAAAGAAAAACACTGGTTTTAGGAAGCAGTCAAATATTCAAAAAATATCTAATTCATCGAT
TCAATCATCCATTACTTCTTTATCTGGTGATGCAAGCCAACCCCGATTTGATTTTTTTCCAATAAACAATAGAAATGTTT
TATTAAAAAGCCCCTTTTTCAATCATATCGGCTCAGAATTTCAACCCATGGTATCCAAAAGGGATGTAAACTCAATCTCG
ATTACATTACCAATTAAACACAATGTTCATCGAAATCATAATAGTAATTTGCCAGTTGACTCAACATCAGTCGTGGACTC
ATCTAATCAACAGGATCATATTTCCTATTTACATATATGCTTTACTCATGAGGAAGGAAAATGGTATTTATTTCTAAAGT
GTTTCACAACGCTGGGTGTTTTTAATTATGATTTTGCACCATTATTAAAAATACTACATAAACCAGACATAAGAACTTAT
CCCATGAGTATGGGTTGCCCTGGGGTTATTGATAGGACAGAGCTCGTTGACATGGATAGAACAATTTATGTCAGGCAGTT
TATTATACATGGGCCTGATGATGAGGCTAAAATCTTGCAAGATATTCATGATTTCAATATGAACTGTTTGAGGCGGTTTG
AAGAGTTAACCTACGGTAGAGATAATAGTGCTTATAGAAACTCTCAAGCTCTGGGGAGAATTTTGCATAAAATTATAACT
GCTTATCAAGAAGTAACTGTAAATGAATATGATATAGCATTGAACCGGCTTAAGATTGTGTTTCAAGATCAAGCATTTCA
AAATGATCCACAAATTTGTTTGTCTTTGACTCATATAGTCAATGCCTTGATTGTTTTAAGTCAAAAAAAGGAACTTAATA
ACAAAGGAGTGGAAATTGATGAACACCAGTTACATCTCATTTTAAAAGAACTTGCAAAACATGAAGGTAAAAAATTTAAA
AATAATCTATGGTTTCCTATAGGGACTGTTGATGCAATTAGACAAGAGTTAGAAGAACTGTTTATTTCAAAGCAAACTAT
ATCTGCAGCACCTATAATGAATTAA

Upstream 100 bases:

>100_bases
ACATGAAACAATATCTATTGACCGCATATTCATAATTAAGATACCTTGCGCTAGTTGATAATGGATTGAAAATTTGAGTC
ATTAAAGGAGATGTTAAAAT

Downstream 100 bases:

>100_bases
GTACTGCCAGTTACAATTTAATCAAGGACGATAAAAATGAAACAAATTAAAGGAATACTATTATCAATAATATCTTTATC
ATTCTTGCCGTTTCTGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKIFKGLKKNTGFRKQSNIQKISNSSIQSSITSLSGDASQPRFDFFPINNRNVLLKSPFFNHIGSEFQPMVSKRDVNSIS
ITLPIKHNVHRNHNSNLPVDSTSVVDSSNQQDHISYLHICFTHEEGKWYLFLKCFTTLGVFNYDFAPLLKILHKPDIRTY
PMSMGCPGVIDRTELVDMDRTIYVRQFIIHGPDDEAKILQDIHDFNMNCLRRFEELTYGRDNSAYRNSQALGRILHKIIT
AYQEVTVNEYDIALNRLKIVFQDQAFQNDPQICLSLTHIVNALIVLSQKKELNNKGVEIDEHQLHLILKELAKHEGKKFK
NNLWFPIGTVDAIRQELEELFISKQTISAAPIMN

Sequences:

>Translated_354_residues
MKIFKGLKKNTGFRKQSNIQKISNSSIQSSITSLSGDASQPRFDFFPINNRNVLLKSPFFNHIGSEFQPMVSKRDVNSIS
ITLPIKHNVHRNHNSNLPVDSTSVVDSSNQQDHISYLHICFTHEEGKWYLFLKCFTTLGVFNYDFAPLLKILHKPDIRTY
PMSMGCPGVIDRTELVDMDRTIYVRQFIIHGPDDEAKILQDIHDFNMNCLRRFEELTYGRDNSAYRNSQALGRILHKIIT
AYQEVTVNEYDIALNRLKIVFQDQAFQNDPQICLSLTHIVNALIVLSQKKELNNKGVEIDEHQLHLILKELAKHEGKKFK
NNLWFPIGTVDAIRQELEELFISKQTISAAPIMN
>Mature_354_residues
MKIFKGLKKNTGFRKQSNIQKISNSSIQSSITSLSGDASQPRFDFFPINNRNVLLKSPFFNHIGSEFQPMVSKRDVNSIS
ITLPIKHNVHRNHNSNLPVDSTSVVDSSNQQDHISYLHICFTHEEGKWYLFLKCFTTLGVFNYDFAPLLKILHKPDIRTY
PMSMGCPGVIDRTELVDMDRTIYVRQFIIHGPDDEAKILQDIHDFNMNCLRRFEELTYGRDNSAYRNSQALGRILHKIIT
AYQEVTVNEYDIALNRLKIVFQDQAFQNDPQICLSLTHIVNALIVLSQKKELNNKGVEIDEHQLHLILKELAKHEGKKFK
NNLWFPIGTVDAIRQELEELFISKQTISAAPIMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40802; Mature: 40802

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFKGLKKNTGFRKQSNIQKISNSSIQSSITSLSGDASQPRFDFFPINNRNVLLKSPFF
CCHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCHH
NHIGSEFQPMVSKRDVNSISITLPIKHNVHRNHNSNLPVDSTSVVDSSNQQDHISYLHIC
HHCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEE
FTHEEGKWYLFLKCFTTLGVFNYDFAPLLKILHKPDIRTYPMSMGCPGVIDRTELVDMDR
EEECCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCH
TIYVRQFIIHGPDDEAKILQDIHDFNMNCLRRFEELTYGRDNSAYRNSQALGRILHKIIT
HEEEEEHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AYQEVTVNEYDIALNRLKIVFQDQAFQNDPQICLSLTHIVNALIVLSQKKELNNKGVEID
HHHHHCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EHQLHLILKELAKHEGKKFKNNLWFPIGTVDAIRQELEELFISKQTISAAPIMN
HHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIFKGLKKNTGFRKQSNIQKISNSSIQSSITSLSGDASQPRFDFFPINNRNVLLKSPFF
CCHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCHH
NHIGSEFQPMVSKRDVNSISITLPIKHNVHRNHNSNLPVDSTSVVDSSNQQDHISYLHIC
HHCCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEE
FTHEEGKWYLFLKCFTTLGVFNYDFAPLLKILHKPDIRTYPMSMGCPGVIDRTELVDMDR
EEECCCCEEEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCH
TIYVRQFIIHGPDDEAKILQDIHDFNMNCLRRFEELTYGRDNSAYRNSQALGRILHKIIT
HEEEEEHEEECCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AYQEVTVNEYDIALNRLKIVFQDQAFQNDPQICLSLTHIVNALIVLSQKKELNNKGVEID
HHHHHCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EHQLHLILKELAKHEGKKFKNNLWFPIGTVDAIRQELEELFISKQTISAAPIMN
HHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA