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The map label for this gene is yfiO [C]

Identifier: 54294130

GI number: 54294130

Start: 1335964

End: 1336737

Strand: Direct

Name: yfiO [C]

Synonym: lpl1194

Alternate gene names: 54294130

Gene position: 1335964-1336737 (Clockwise)

Preceding gene: 54294129

Following gene: 54294134

Centisome position: 39.93

GC content: 40.44

Gene sequence:

>774_bases
ATGAAACGAATTCATGTGTTATTTCTTATTGGGTTAGTTGTTGGAATCTCATCGTGTACTAAATGGGGAAAAGATGATGA
GGATAATAACCCATATAAAGGCATGACAGCTAAGCAGCTCTACACTGCGGCACAAACCTCTTTAAAAAAAGAGGAATATG
CCACTGCTGCCAAACAGCTGGAAGCCATGGAGTCTATGTATCCTTTTAGTGACTATACTGAAAGCTCTCAAATGCAGCTT
ATTTATGCCTATTATAAAGACGAAGATTATCCTTCTGCTGCAGCAACGGCTGAGCGCTTTATTCATCTGTACCCACGCGC
AAAAAACGTTGATTATGCCTATTATATGAGAGGTTTGGCTAACTTCCAGCAAACACGAGGCGTATTTGCCAAAATGCTTC
CTATGGATGAATCCTGGAGGGACCCTGGAACACAAACTCAAGCACTGGTTGACTTTGCTACTTTAATCCAGAAATTTCCT
GACAGCAAATATAAAGCCAATGCTTTGCAACGTATGATTTATCTACGAAATATGTTTGCTCAGCACGAACTCAATGTCTC
TCTTTACTACTTCAAACGTAAAATGTATGTGGCTGCTATTGAACGAGCCAGTTATCTAGTGAAAAACTATCCTCAAGCTC
CCAGCGCTCAAAAGGCTTTAGTGGTAATGTACGAAGCCAATAAAGCATTAGGGCTTAACAAGGCAGCGGAGGATGCTATG
GCTGTTTACAAGGCTACTTATCATACATCCAATATGGTCAGAATTAATTCTTGA

Upstream 100 bases:

>100_bases
AATAGGTTGTTCGCAAATTAACTGGTCCTAGGTATAATGTTCCAAATTTTCCAGTTGCTGTACTTATAAATACAGCAGAT
ATAATTGATAGGTGTACTTT

Downstream 100 bases:

>100_bases
TGAGTACAGAAATTTATAGAGTTTATTCTGTCAGTTGGGTTCAGCAAGTGATGTGCAATCCACTCGTTTTCTCTTGAGTC
AAGATGAGAGGGAGCTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMVRINS

Sequences:

>Translated_257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMVRINS
>Mature_257_residues
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQLEAMESMYPFSDYTESSQMQL
IYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLANFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFP
DSKYKANALQRMIYLRNMFAQHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
AVYKATYHTSNMVRINS

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=235, Percent_Identity=33.1914893617021, Blast_Score=151, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29527; Mature: 29527

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AVYKATYHTSNMVRINS
HHHHHHHCCCCEEEECC
>Mature Secondary Structure
MKRIHVLFLIGLVVGISSCTKWGKDDEDNNPYKGMTAKQLYTAAQTSLKKEEYATAAKQL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAMESMYPFSDYTESSQMQLIYAYYKDEDYPSAAATAERFIHLYPRAKNVDYAYYMRGLA
HHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHH
NFQQTRGVFAKMLPMDESWRDPGTQTQALVDFATLIQKFPDSKYKANALQRMIYLRNMFA
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
QHELNVSLYYFKRKMYVAAIERASYLVKNYPQAPSAQKALVVMYEANKALGLNKAAEDAM
HHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHH
AVYKATYHTSNMVRINS
HHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]