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The map label for this gene is 54294078

Identifier: 54294078

GI number: 54294078

Start: 1272350

End: 1273252

Strand: Direct

Name: 54294078

Synonym: lpl1142

Alternate gene names: NA

Gene position: 1272350-1273252 (Clockwise)

Preceding gene: 54294070

Following gene: 54294087

Centisome position: 38.03

GC content: 36.21

Gene sequence:

>903_bases
ATGAAGAAAATCATTTTATACTTGTTTGTCGCTATTGGAGTTTACGCTGTCCTTCTATTTGCGTACAACATGCTGATAAA
TCGAGCTGGACAAACATTATATGGGGGCGCTCCAGCAATGGGGAATACCTATCCCACTGTTGAAAAAGTCAATGCGGTAC
CAGGTGGTTCTGGTGATAGCAACAATAATCCTTCTGCTTCAGAGCAAGTCATGAAAGGAATGATAATTCGTAATGCGAAT
ATCACTCTGGAAGTCAATGATCCGACTAAAGTTATTGATGAAATTATGCAGATGGCTGAGCGAGAGGGAGGATATGTAGT
AAACTCTAACTTAAGACAGGATAGTTTCTATGTTGGTGGGAATATCGCTCAAATCAGCATTAGAATACCAAGTAATCGTT
TAAACAATGTATTGCAAAATTTAAAATCTTTGGCTGTTAAAGTAATTGAGGAATCGATCACGAGTGAGGACATTACCCGG
CAATACGTTGATCTTGAAAGTGAGCTGAAAAATTACAGGGTTGCTAAAGATCAATTAAATAAAATTATGCAAGGTGCAAA
AAATACTTCTGATGTACTTGCTGTCTATCAACAACTGAGTGAAACGCAGAGAAAAATTGATGTGATAGAAGGGCAGATTA
AGTATTACAAGGAATCTATCGCATATTCACTAGTTACAATTTACCTGCAGACTGATCCTGCGATAAAAAATACACAAAAT
TCCACATGGCAAATATCTGAAGTTGTGATGAAATCTTACCAGGCTTTAATAGATAATTTACGGCAGTTTACTTATGGAGT
CATCGAATTTGTTATCTTGTTTGTCCCAATGATCTTACTGTGGGGAATTATTGCTTTATTCGTATTTTGGATAGGTAGGG
TAATTTATTCTCGTTTTAAATAA

Upstream 100 bases:

>100_bases
GTAGTTAAATTAACTATAAGTTAAATCAAAAAATGCTATTGGTTATTTCAATTAATCTATGCCACACTTATTTTTATAAT
ATCGGACTATTGAATTAAAA

Downstream 100 bases:

>100_bases
TAGAATTTGCAGCGTATTTCAGATTTTGATTTAAGTGAGAGCTAAATACTCCCAACAGGATAGTTGGGAGCAAAAATAAT
CTTTTAGTTTAAACTTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Anti-Sigma Factor; Coiled-Coil Protein

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKIILYLFVAIGVYAVLLFAYNMLINRAGQTLYGGAPAMGNTYPTVEKVNAVPGGSGDSNNNPSASEQVMKGMIIRNAN
ITLEVNDPTKVIDEIMQMAEREGGYVVNSNLRQDSFYVGGNIAQISIRIPSNRLNNVLQNLKSLAVKVIEESITSEDITR
QYVDLESELKNYRVAKDQLNKIMQGAKNTSDVLAVYQQLSETQRKIDVIEGQIKYYKESIAYSLVTIYLQTDPAIKNTQN
STWQISEVVMKSYQALIDNLRQFTYGVIEFVILFVPMILLWGIIALFVFWIGRVIYSRFK

Sequences:

>Translated_300_residues
MKKIILYLFVAIGVYAVLLFAYNMLINRAGQTLYGGAPAMGNTYPTVEKVNAVPGGSGDSNNNPSASEQVMKGMIIRNAN
ITLEVNDPTKVIDEIMQMAEREGGYVVNSNLRQDSFYVGGNIAQISIRIPSNRLNNVLQNLKSLAVKVIEESITSEDITR
QYVDLESELKNYRVAKDQLNKIMQGAKNTSDVLAVYQQLSETQRKIDVIEGQIKYYKESIAYSLVTIYLQTDPAIKNTQN
STWQISEVVMKSYQALIDNLRQFTYGVIEFVILFVPMILLWGIIALFVFWIGRVIYSRFK
>Mature_300_residues
MKKIILYLFVAIGVYAVLLFAYNMLINRAGQTLYGGAPAMGNTYPTVEKVNAVPGGSGDSNNNPSASEQVMKGMIIRNAN
ITLEVNDPTKVIDEIMQMAEREGGYVVNSNLRQDSFYVGGNIAQISIRIPSNRLNNVLQNLKSLAVKVIEESITSEDITR
QYVDLESELKNYRVAKDQLNKIMQGAKNTSDVLAVYQQLSETQRKIDVIEGQIKYYKESIAYSLVTIYLQTDPAIKNTQN
STWQISEVVMKSYQALIDNLRQFTYGVIEFVILFVPMILLWGIIALFVFWIGRVIYSRFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33841; Mature: 33841

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIILYLFVAIGVYAVLLFAYNMLINRAGQTLYGGAPAMGNTYPTVEKVNAVPGGSGDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
NNNPSASEQVMKGMIIRNANITLEVNDPTKVIDEIMQMAEREGGYVVNSNLRQDSFYVGG
CCCCCHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECC
NIAQISIRIPSNRLNNVLQNLKSLAVKVIEESITSEDITRQYVDLESELKNYRVAKDQLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIMQGAKNTSDVLAVYQQLSETQRKIDVIEGQIKYYKESIAYSLVTIYLQTDPAIKNTQN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
STWQISEVVMKSYQALIDNLRQFTYGVIEFVILFVPMILLWGIIALFVFWIGRVIYSRFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIILYLFVAIGVYAVLLFAYNMLINRAGQTLYGGAPAMGNTYPTVEKVNAVPGGSGDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC
NNNPSASEQVMKGMIIRNANITLEVNDPTKVIDEIMQMAEREGGYVVNSNLRQDSFYVGG
CCCCCHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECC
NIAQISIRIPSNRLNNVLQNLKSLAVKVIEESITSEDITRQYVDLESELKNYRVAKDQLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KIMQGAKNTSDVLAVYQQLSETQRKIDVIEGQIKYYKESIAYSLVTIYLQTDPAIKNTQN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
STWQISEVVMKSYQALIDNLRQFTYGVIEFVILFVPMILLWGIIALFVFWIGRVIYSRFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA