Click here to switch to the map view.

The map label for this gene is 54294036

Identifier: 54294036

GI number: 54294036

Start: 1222407

End: 1222865

Strand: Direct

Name: 54294036

Synonym: lpl1098

Alternate gene names: NA

Gene position: 1222407-1222865 (Clockwise)

Preceding gene: 54294035

Following gene: 54294037

Centisome position: 36.54

GC content: 28.76

Gene sequence:

>459_bases
ATGGAGCATAATTGGTATGATAACAACAGCAAATTATCTGTAATGGGAATAATTTGTTTGATTATTTTTTTAGTCCTCTT
TTTCTTTAGTTTGTTTATAATGCCTTTTTTAATCTGGGAATTACATTATAATGTTCCTGACTTTGTTAGCAATATGATAG
CATACCTTGAAGATACCTATTATTATTCTTCGCCTGTAAGTAAGACTCTTGTCTGGTTGACTTTTTTTATACCTTGCTTG
ATTACCGGGTATTTTTCTTATTACATTTCTTGCTCTATTGATAAGAAAAATTTGCTGAAAGACGCAAACATTGATGAAGA
ACAATCAAAAGAAATTTCTTCGGTAACTAATGAACAGATTAAGGAGTCAGCAAGTTTAGGATTTAAAATTCTTATTCTAA
TGGCGGCTATTATTTTAATCATTTTCATATTACAAGAATTCGTTAAATTCACATCATAA

Upstream 100 bases:

>100_bases
TCTAGCTTAAAATATATTCGGTTATACGATGGATGCTCTGATGTCTTAAAATTTAAAAAAGAATAATTTTAGTTAGCTGG
TCATTTTATGGAAGGAGCCT

Downstream 100 bases:

>100_bases
CTTGAAGTACCTCTTTGTTTTCCGCAGAGTTAGAGAAAATGTGAGCTTTAAAAATTCTTAAGGTAAAAATTTTCCTCAAA
CAGTTGGTAAATTAATGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MEHNWYDNNSKLSVMGIICLIIFLVLFFFSLFIMPFLIWELHYNVPDFVSNMIAYLEDTYYYSSPVSKTLVWLTFFIPCL
ITGYFSYYISCSIDKKNLLKDANIDEEQSKEISSVTNEQIKESASLGFKILILMAAIILIIFILQEFVKFTS

Sequences:

>Translated_152_residues
MEHNWYDNNSKLSVMGIICLIIFLVLFFFSLFIMPFLIWELHYNVPDFVSNMIAYLEDTYYYSSPVSKTLVWLTFFIPCL
ITGYFSYYISCSIDKKNLLKDANIDEEQSKEISSVTNEQIKESASLGFKILILMAAIILIIFILQEFVKFTS
>Mature_152_residues
MEHNWYDNNSKLSVMGIICLIIFLVLFFFSLFIMPFLIWELHYNVPDFVSNMIAYLEDTYYYSSPVSKTLVWLTFFIPCL
ITGYFSYYISCSIDKKNLLKDANIDEEQSKEISSVTNEQIKESASLGFKILILMAAIILIIFILQEFVKFTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17770; Mature: 17770

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHNWYDNNSKLSVMGIICLIIFLVLFFFSLFIMPFLIWELHYNVPDFVSNMIAYLEDTY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YYSSPVSKTLVWLTFFIPCLITGYFSYYISCSIDKKNLLKDANIDEEQSKEISSVTNEQI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
KESASLGFKILILMAAIILIIFILQEFVKFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHNWYDNNSKLSVMGIICLIIFLVLFFFSLFIMPFLIWELHYNVPDFVSNMIAYLEDTY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
YYSSPVSKTLVWLTFFIPCLITGYFSYYISCSIDKKNLLKDANIDEEQSKEISSVTNEQI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
KESASLGFKILILMAAIILIIFILQEFVKFTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA