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The map label for this gene is yqaB [C]

Identifier: 54294034

GI number: 54294034

Start: 1221230

End: 1221898

Strand: Direct

Name: yqaB [C]

Synonym: lpl1096

Alternate gene names: 54294034

Gene position: 1221230-1221898 (Clockwise)

Preceding gene: 54294033

Following gene: 54294035

Centisome position: 36.5

GC content: 41.85

Gene sequence:

>669_bases
ATGATAGATACAATAATCTTTGATTTTGATGGTGTAATACTTAACAGTGAACCCATGCATTTTGAAGCGTTAGTCCAGGT
ACTGAATCAATCTGGGATTAATCTTGCTTATGAAGAATATATGACCCATTACCTGGGATTAAGCGATATTAGTGTGTTTC
CCAAAATACTGAATGATAAGGGTCTTGCGTTCTCATCCACTGAAATACGTCAACTTATAGAGCGCAAGGTCACAGTTTAT
AATGAGTTAATCGAGAGCAGTGAGCAATTGCCTATGACCCCTGATCTGGATTGGTTTTTAGTCCGAGCGGCGAAACAATA
TGGAAAAATCGGCATCTGCAGCGGATCCAATCGCCATTCAATAATAAAAATTCTTGAAAAAATTCATTGCGGTCGCTTGG
CTTGCTATTTTAAAACCATTGTAAGTTGTGAAGATGTAAGCTTGGGTAAACCGTCTCCAGAAGGTTATTTGCTCGCAGCG
CATCATTTGCAATCCAATCCTGAAAACTGTTTGGTTATAGAGGACTCAGAGCACGGGGTAGCAGCCGCGAAAGCGGGAGG
AATGCTGGTTGCGGGTTTACTCACAACACTGAGCAGGGAGCAGCTGGCCAATGCGGATATGATTGTGCATGATTTTAAAG
AGCTGGCTCATTTGTTGAACTCCCACTAA

Upstream 100 bases:

>100_bases
AATGAAATATCCCTTTTATCAAACGCCCAGCATGAAAGTAATTTCTCTTGAGTAATTGTCAATTTATTTGTTTAACAATG
TTAACCTACTGAGGCAATAC

Downstream 100 bases:

>100_bases
AAAGAGACAGGTTATGCAAGAGGTCTATTATAAAGACTATACTTAATGTTATTAGAAAAATAATTAACTACAAAATTCTG
AAGATAAGAAAAGCAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIDTIIFDFDGVILNSEPMHFEALVQVLNQSGINLAYEEYMTHYLGLSDISVFPKILNDKGLAFSSTEIRQLIERKVTVY
NELIESSEQLPMTPDLDWFLVRAAKQYGKIGICSGSNRHSIIKILEKIHCGRLACYFKTIVSCEDVSLGKPSPEGYLLAA
HHLQSNPENCLVIEDSEHGVAAAKAGGMLVAGLLTTLSREQLANADMIVHDFKELAHLLNSH

Sequences:

>Translated_222_residues
MIDTIIFDFDGVILNSEPMHFEALVQVLNQSGINLAYEEYMTHYLGLSDISVFPKILNDKGLAFSSTEIRQLIERKVTVY
NELIESSEQLPMTPDLDWFLVRAAKQYGKIGICSGSNRHSIIKILEKIHCGRLACYFKTIVSCEDVSLGKPSPEGYLLAA
HHLQSNPENCLVIEDSEHGVAAAKAGGMLVAGLLTTLSREQLANADMIVHDFKELAHLLNSH
>Mature_222_residues
MIDTIIFDFDGVILNSEPMHFEALVQVLNQSGINLAYEEYMTHYLGLSDISVFPKILNDKGLAFSSTEIRQLIERKVTVY
NELIESSEQLPMTPDLDWFLVRAAKQYGKIGICSGSNRHSIIKILEKIHCGRLACYFKTIVSCEDVSLGKPSPEGYLLAA
HHLQSNPENCLVIEDSEHGVAAAKAGGMLVAGLLTTLSREQLANADMIVHDFKELAHLLNSH

Specific function: Unknown

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789046, Length=191, Percent_Identity=30.8900523560209, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787576, Length=204, Percent_Identity=28.921568627451, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788021, Length=183, Percent_Identity=27.3224043715847, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24644; Mature: 24644

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDTIIFDFDGVILNSEPMHFEALVQVLNQSGINLAYEEYMTHYLGLSDISVFPKILNDK
CCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
GLAFSSTEIRQLIERKVTVYNELIESSEQLPMTPDLDWFLVRAAKQYGKIGICSGSNRHS
CCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHH
IIKILEKIHCGRLACYFKTIVSCEDVSLGKPSPEGYLLAAHHLQSNPENCLVIEDSEHGV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCC
AAAKAGGMLVAGLLTTLSREQLANADMIVHDFKELAHLLNSH
HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDTIIFDFDGVILNSEPMHFEALVQVLNQSGINLAYEEYMTHYLGLSDISVFPKILNDK
CCCEEEEECCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCC
GLAFSSTEIRQLIERKVTVYNELIESSEQLPMTPDLDWFLVRAAKQYGKIGICSGSNRHS
CCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHH
IIKILEKIHCGRLACYFKTIVSCEDVSLGKPSPEGYLLAAHHLQSNPENCLVIEDSEHGV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCC
AAAKAGGMLVAGLLTTLSREQLANADMIVHDFKELAHLLNSH
HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]