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The map label for this gene is 54294012

Identifier: 54294012

GI number: 54294012

Start: 1203936

End: 1205711

Strand: Direct

Name: 54294012

Synonym: lpl1073

Alternate gene names: NA

Gene position: 1203936-1205711 (Clockwise)

Preceding gene: 54294011

Following gene: 54294014

Centisome position: 35.98

GC content: 43.98

Gene sequence:

>1776_bases
ATGAACGTTTCTGGAGAAACAGTGATGCTGCAAAATCAAATTATTACGCTAAAAAACAAAAACGGTCATAGCCCTATAAC
CTGTGAGTACGCTGGAGGTTGTTTTAAATTAAATGAGCAGGGCGTGTCTTTCCTTGGAAAAGATAAAGACGGTAATCCAA
TGGCGCCAAAGTGGATTTGTTCTCCTTTGTATGTGGTGGCTAAAACGCGTGATGCTAAAAGTGGGGAGTGGGGTCGATTA
CTCGAATGGCAGGATGATGATGGGATCACTCATCAATGGGCAATGCCTTTAGCCTTGTTACAAGGAGATGCATCTGAAGT
TAGACGAGAGTTGGCTAGTCTTGGTTTAACCATTTCACCTCATAGAATTTCTCGGGATTTACTGGCTACCTATTTGCAGG
TGTTCCCTGTTGAAGACCGTGCACGTTGTGTCGAAAAACTGGGTTGGCATGAAAACCTTTTTGTCACTGCCTCACAAATT
ATTGGACATTCCTCCGAGAAAATTGTTTTTCAAAATAGTCATGCGATTGAATCTGCTATGTCTGTATTCGGTACTGTAGA
TGATTGGCGAGAATCAATTGGCCATCTTGCTTCTGGCAATTCACGGTTAGTTTTTGCCATCTCCACTGCTTTTGCTCCTG
CTTTGGCAAAGATTGCTGGTGAAGATTCAGGCGGGTTTCATTTTAGAGGGGCTTCTTCTAGTGGTAAAAGTACCGCTTTA
AAAGTCGCAGCTTCGGTTTGGGGTAATCCACAGGCTTATTGCCGATTATGGCGCAGTACCACTAATGGACTTGAAGGACT
GGCTGCTTTGCATAACGATGGCTTATTAATTCTGGATGAATTAAGTCAGATGGATCCCAAAGAAGCAGGGGAGGCAGCTT
ACTTGCTAGCCAATGGTCAAGGTAAAACGCGAGCATCACGTCATGGAGCAGTCAAGCCATCGTCTCGATGGTCATTGTTC
TTTCTCTCTGCGGGAGAAGAATCCCTAATGTCTTTGATGGCCAGAGTAGGGCAGAAAACCAATGCAGGCCAAGAAATCCG
GTTAGCGGATATTGAAGCTGATGCTGGTTTGAATATGGGGATTTTTGAAAAAATCCATAATCAACTTAGCCCAGCTACCA
TGGCCTTATCCTTAAAGGAATATTCCAGCAAATATTATGGTGCTGTGGGTATGGCATGGTTACAAAAGGTGGTGGAAAAT
CAACCAAGTATTGCAACTGGCATTGCTGATGCGATGCAAGAATTTGTGAATAGTGTTGTCTTACCAGACTCAACGGGACA
AATTATCCGCGTAGCCCGGCGGTTTGCCTTAGTTGCAGTAGCTGGCGAATTGGCTAGCCAGTATGGATTGACCGGCTGGC
AAGAAGGAGAGTCTATCTCTGCATCTTACAAATGTTATAGAGCATGGCTGGAACATTTTGGCATGGAGGGTAACAAGGAA
GACAGAGCGATATTAGCTCAAGTCAGAGCATTTTTTGAATCTCATGGTGCCAGTCGGTTTGATAATATCAGAACGCCAAA
CAATGAGCGGATTCAAAATCGTGCCGGATTTTATTGTACTGATGAGGCAGGTTTTCGCGTGTATATGGTATTGACGGAAG
TCTTTAAAAAAGAGCTATGTCTGGGGTTTGAGCCTAGAATGGTAGTGCGTGTATTAATGAATGAAGGCTGGTTAAAGCCA
GCCCCAGATGGATTGCCTTCTCATAAACCAAGAGTTAAGGGAGTTGGAACACCCAGATTATACGTATTTACGGATAAAAT
CTGGGGTGGCGAGTAA

Upstream 100 bases:

>100_bases
TCGATCTACTAGTGACGTAGGGGAATTCCTTTCTTTGGTCAACGAATAAATTCCATAGAAGAAATAGATTGTTCACGGAT
GGATAGAGTTTCTATCTTCC

Downstream 100 bases:

>100_bases
CTTTTCTCGATAAATCAGAACATTTGTCCCAATATTTTTAAATGTTGGGACATCTTGGGACGGCTATAGGCCAGTATTTA
TGGGCTGTCCCTCATGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; Inner Membrane; Primase C 2 Family; Bifunctional DNA Primase/Polymerase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Zinc Finger CHC2-Family Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MNVSGETVMLQNQIITLKNKNGHSPITCEYAGGCFKLNEQGVSFLGKDKDGNPMAPKWICSPLYVVAKTRDAKSGEWGRL
LEWQDDDGITHQWAMPLALLQGDASEVRRELASLGLTISPHRISRDLLATYLQVFPVEDRARCVEKLGWHENLFVTASQI
IGHSSEKIVFQNSHAIESAMSVFGTVDDWRESIGHLASGNSRLVFAISTAFAPALAKIAGEDSGGFHFRGASSSGKSTAL
KVAASVWGNPQAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMDPKEAGEAAYLLANGQGKTRASRHGAVKPSSRWSLF
FLSAGEESLMSLMARVGQKTNAGQEIRLADIEADAGLNMGIFEKIHNQLSPATMALSLKEYSSKYYGAVGMAWLQKVVEN
QPSIATGIADAMQEFVNSVVLPDSTGQIIRVARRFALVAVAGELASQYGLTGWQEGESISASYKCYRAWLEHFGMEGNKE
DRAILAQVRAFFESHGASRFDNIRTPNNERIQNRAGFYCTDEAGFRVYMVLTEVFKKELCLGFEPRMVVRVLMNEGWLKP
APDGLPSHKPRVKGVGTPRLYVFTDKIWGGE

Sequences:

>Translated_591_residues
MNVSGETVMLQNQIITLKNKNGHSPITCEYAGGCFKLNEQGVSFLGKDKDGNPMAPKWICSPLYVVAKTRDAKSGEWGRL
LEWQDDDGITHQWAMPLALLQGDASEVRRELASLGLTISPHRISRDLLATYLQVFPVEDRARCVEKLGWHENLFVTASQI
IGHSSEKIVFQNSHAIESAMSVFGTVDDWRESIGHLASGNSRLVFAISTAFAPALAKIAGEDSGGFHFRGASSSGKSTAL
KVAASVWGNPQAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMDPKEAGEAAYLLANGQGKTRASRHGAVKPSSRWSLF
FLSAGEESLMSLMARVGQKTNAGQEIRLADIEADAGLNMGIFEKIHNQLSPATMALSLKEYSSKYYGAVGMAWLQKVVEN
QPSIATGIADAMQEFVNSVVLPDSTGQIIRVARRFALVAVAGELASQYGLTGWQEGESISASYKCYRAWLEHFGMEGNKE
DRAILAQVRAFFESHGASRFDNIRTPNNERIQNRAGFYCTDEAGFRVYMVLTEVFKKELCLGFEPRMVVRVLMNEGWLKP
APDGLPSHKPRVKGVGTPRLYVFTDKIWGGE
>Mature_591_residues
MNVSGETVMLQNQIITLKNKNGHSPITCEYAGGCFKLNEQGVSFLGKDKDGNPMAPKWICSPLYVVAKTRDAKSGEWGRL
LEWQDDDGITHQWAMPLALLQGDASEVRRELASLGLTISPHRISRDLLATYLQVFPVEDRARCVEKLGWHENLFVTASQI
IGHSSEKIVFQNSHAIESAMSVFGTVDDWRESIGHLASGNSRLVFAISTAFAPALAKIAGEDSGGFHFRGASSSGKSTAL
KVAASVWGNPQAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMDPKEAGEAAYLLANGQGKTRASRHGAVKPSSRWSLF
FLSAGEESLMSLMARVGQKTNAGQEIRLADIEADAGLNMGIFEKIHNQLSPATMALSLKEYSSKYYGAVGMAWLQKVVEN
QPSIATGIADAMQEFVNSVVLPDSTGQIIRVARRFALVAVAGELASQYGLTGWQEGESISASYKCYRAWLEHFGMEGNKE
DRAILAQVRAFFESHGASRFDNIRTPNNERIQNRAGFYCTDEAGFRVYMVLTEVFKKELCLGFEPRMVVRVLMNEGWLKP
APDGLPSHKPRVKGVGTPRLYVFTDKIWGGE

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64878; Mature: 64878

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSGETVMLQNQIITLKNKNGHSPITCEYAGGCFKLNEQGVSFLGKDKDGNPMAPKWIC
CCCCCCEEEEECEEEEEECCCCCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCHHHC
SPLYVVAKTRDAKSGEWGRLLEWQDDDGITHQWAMPLALLQGDASEVRRELASLGLTISP
CCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEECH
HRISRDLLATYLQVFPVEDRARCVEKLGWHENLFVTASQIIGHSSEKIVFQNSHAIESAM
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCEEEEECCHHHHHHH
SVFGTVDDWRESIGHLASGNSRLVFAISTAFAPALAKIAGEDSGGFHFRGASSSGKSTAL
HHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHH
KVAASVWGNPQAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMDPKEAGEAAYLLANGQ
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHCCCCCCCCCEEEEEECCC
GKTRASRHGAVKPSSRWSLFFLSAGEESLMSLMARVGQKTNAGQEIRLADIEADAGLNMG
CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHH
IFEKIHNQLSPATMALSLKEYSSKYYGAVGMAWLQKVVENQPSIATGIADAMQEFVNSVV
HHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
LPDSTGQIIRVARRFALVAVAGELASQYGLTGWQEGESISASYKCYRAWLEHFGMEGNKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
DRAILAQVRAFFESHGASRFDNIRTPNNERIQNRAGFYCTDEAGFRVYMVLTEVFKKELC
HHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHH
LGFEPRMVVRVLMNEGWLKPAPDGLPSHKPRVKGVGTPRLYVFTDKIWGGE
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNVSGETVMLQNQIITLKNKNGHSPITCEYAGGCFKLNEQGVSFLGKDKDGNPMAPKWIC
CCCCCCEEEEECEEEEEECCCCCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCHHHC
SPLYVVAKTRDAKSGEWGRLLEWQDDDGITHQWAMPLALLQGDASEVRRELASLGLTISP
CCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEECH
HRISRDLLATYLQVFPVEDRARCVEKLGWHENLFVTASQIIGHSSEKIVFQNSHAIESAM
HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCEEEEECCHHHHHHH
SVFGTVDDWRESIGHLASGNSRLVFAISTAFAPALAKIAGEDSGGFHFRGASSSGKSTAL
HHHCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHH
KVAASVWGNPQAYCRLWRSTTNGLEGLAALHNDGLLILDELSQMDPKEAGEAAYLLANGQ
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEHHHCCCCCCCCCEEEEEECCC
GKTRASRHGAVKPSSRWSLFFLSAGEESLMSLMARVGQKTNAGQEIRLADIEADAGLNMG
CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHH
IFEKIHNQLSPATMALSLKEYSSKYYGAVGMAWLQKVVENQPSIATGIADAMQEFVNSVV
HHHHHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEE
LPDSTGQIIRVARRFALVAVAGELASQYGLTGWQEGESISASYKCYRAWLEHFGMEGNKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
DRAILAQVRAFFESHGASRFDNIRTPNNERIQNRAGFYCTDEAGFRVYMVLTEVFKKELC
HHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEEECCCCCEEHHHHHHHHHHHHH
LGFEPRMVVRVLMNEGWLKPAPDGLPSHKPRVKGVGTPRLYVFTDKIWGGE
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA