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The map label for this gene is 54293981

Identifier: 54293981

GI number: 54293981

Start: 1166302

End: 1167201

Strand: Reverse

Name: 54293981

Synonym: lpl1038

Alternate gene names: NA

Gene position: 1167201-1166302 (Counterclockwise)

Preceding gene: 54293983

Following gene: 54293980

Centisome position: 34.89

GC content: 41.67

Gene sequence:

>900_bases
ATGGGATTTTTGTTTGTTACTACTAACGAATTATCCGCACTGATGGGATTGCCTTATATCCAGCAATCGACCTACTTGCT
GGGGATTCGACCTTATATGGATAGGGAAACCTTTCTGGTTGGGGTTAAACGAAAAATCAGTTATCAGCAACTCGCTGAGG
CTTTATATATTGAGCCTCATCAAGGCTTTCAACAATCCGGTAGTCCTAGTCGTCAACAATTGCGAAGAATCATCTATGCG
CTGGAGAGAGCTGGTTTAATCAAGATTGAGTCCATAGGCATGAACCTGATTGTAAAATGCCTTTTAGCTGATACGGATAT
TTCTGTCCAAAATAAACCCGACACAAACCCGACACAGCAACCCGACACAAACCCGAACATCAAAAAGAATTACAAATCAT
CAAGTTACGATGATTTTTCTAAAAAACCCAACACAGTTGAAAACATAAAACCCGACACACCTCATAACTCAGAAAATTTG
TGTGTGTATGTGCGCGCCCAATTTCAAAAATTTTGGGAACTTTATCCACAGAAGCAGGATGAGACTAGAGCATTCCAGGA
GTTTTATAAACTCAAACCCGATGAAACTCTGTTTAGGCAGATGATGGATGCACTGCATGCTCAAATTGAAAACCGTTTAG
ACCTGGAGCTCTGTGGTGAGTGGGTTCCTAAATGGAAATTTCCAGCCAATTGGCTCGCCCAACAATGCTGGAATGATGAT
CTTTTACCCGTAAGAAAACAGGAGCAAGGCCATGCAAACACTCAAACAAGTTTTAGAAAAAAATCAGCCGCAGATATTCT
CGCTGAATCCTGCAAAGAATCCAGCTTCAGCATCAACTTTGAAGACGAACCCCAAACAGGAAACAACGTCATCCACTTCG
ACTCAACAAGAAGCGTATGA

Upstream 100 bases:

>100_bases
TCAACAACACGTTTCGTGTTATTGATTGATACTAAATGAAATTATTTGATATTGCAAACACTGAATTTGGAACAGTGTTT
TTAGATGGATGAATAAGAAA

Downstream 100 bases:

>100_bases
CAAACGGGTGGATACTTTGTTCTTAAGATTTAATGCCATCTATGGTGCCTTATGGCTTTCTGCTTATAACAATGAAAAAG
CCCTTGAAGCAGCCAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Vir Region Protein; Homolog Of LvrA Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MGFLFVTTNELSALMGLPYIQQSTYLLGIRPYMDRETFLVGVKRKISYQQLAEALYIEPHQGFQQSGSPSRQQLRRIIYA
LERAGLIKIESIGMNLIVKCLLADTDISVQNKPDTNPTQQPDTNPNIKKNYKSSSYDDFSKKPNTVENIKPDTPHNSENL
CVYVRAQFQKFWELYPQKQDETRAFQEFYKLKPDETLFRQMMDALHAQIENRLDLELCGEWVPKWKFPANWLAQQCWNDD
LLPVRKQEQGHANTQTSFRKKSAADILAESCKESSFSINFEDEPQTGNNVIHFDSTRSV

Sequences:

>Translated_299_residues
MGFLFVTTNELSALMGLPYIQQSTYLLGIRPYMDRETFLVGVKRKISYQQLAEALYIEPHQGFQQSGSPSRQQLRRIIYA
LERAGLIKIESIGMNLIVKCLLADTDISVQNKPDTNPTQQPDTNPNIKKNYKSSSYDDFSKKPNTVENIKPDTPHNSENL
CVYVRAQFQKFWELYPQKQDETRAFQEFYKLKPDETLFRQMMDALHAQIENRLDLELCGEWVPKWKFPANWLAQQCWNDD
LLPVRKQEQGHANTQTSFRKKSAADILAESCKESSFSINFEDEPQTGNNVIHFDSTRSV
>Mature_298_residues
GFLFVTTNELSALMGLPYIQQSTYLLGIRPYMDRETFLVGVKRKISYQQLAEALYIEPHQGFQQSGSPSRQQLRRIIYAL
ERAGLIKIESIGMNLIVKCLLADTDISVQNKPDTNPTQQPDTNPNIKKNYKSSSYDDFSKKPNTVENIKPDTPHNSENLC
VYVRAQFQKFWELYPQKQDETRAFQEFYKLKPDETLFRQMMDALHAQIENRLDLELCGEWVPKWKFPANWLAQQCWNDDL
LPVRKQEQGHANTQTSFRKKSAADILAESCKESSFSINFEDEPQTGNNVIHFDSTRSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34646; Mature: 34514

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLFVTTNELSALMGLPYIQQSTYLLGIRPYMDRETFLVGVKRKISYQQLAEALYIEPH
CCEEEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHEEHHHHHCCHHHHHHHHCCCCC
QGFQQSGSPSRQQLRRIIYALERAGLIKIESIGMNLIVKCLLADTDISVQNKPDTNPTQQ
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDTNPNIKKNYKSSSYDDFSKKPNTVENIKPDTPHNSENLCVYVRAQFQKFWELYPQKQD
CCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCH
ETRAFQEFYKLKPDETLFRQMMDALHAQIENRLDLELCGEWVPKWKFPANWLAQQCWNDD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCC
LLPVRKQEQGHANTQTSFRKKSAADILAESCKESSFSINFEDEPQTGNNVIHFDSTRSV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
GFLFVTTNELSALMGLPYIQQSTYLLGIRPYMDRETFLVGVKRKISYQQLAEALYIEPH
CEEEEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHEEHHHHHCCHHHHHHHHCCCCC
QGFQQSGSPSRQQLRRIIYALERAGLIKIESIGMNLIVKCLLADTDISVQNKPDTNPTQQ
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDTNPNIKKNYKSSSYDDFSKKPNTVENIKPDTPHNSENLCVYVRAQFQKFWELYPQKQD
CCCCCCCCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCH
ETRAFQEFYKLKPDETLFRQMMDALHAQIENRLDLELCGEWVPKWKFPANWLAQQCWNDD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCC
LLPVRKQEQGHANTQTSFRKKSAADILAESCKESSFSINFEDEPQTGNNVIHFDSTRSV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA