Click here to switch to the map view.

The map label for this gene is 54293961

Identifier: 54293961

GI number: 54293961

Start: 1151715

End: 1151888

Strand: Direct

Name: 54293961

Synonym: lpl1018

Alternate gene names: NA

Gene position: 1151715-1151888 (Clockwise)

Preceding gene: 54293955

Following gene: 54293982

Centisome position: 34.42

GC content: 40.23

Gene sequence:

>174_bases
ATGAGAAGGGTATTTCGGTTGTTGGCCGTTGTTCTTGATGCCATTGTTGGAGTGGCAGAGGATAAACCTGACAAACGCTA
CATGTCTGTTTATGAGGCTCAAGATAAACTTGATAATGGCTTGATCACTATTCGTGAATACAATGAAGCCTTTGAAAGTA
AGGATGTGCTTTAA

Upstream 100 bases:

>100_bases
CAGGGCGCAAATACTAATAAGGCAATCATTGGTAAAACGGTTTGAATTAATACTATAATGGATGAACGGATATAATGTTT
AATCATAGGGATAACTCCAA

Downstream 100 bases:

>100_bases
CATATTCATCGAATTCCTTTTGCAATAATTTTTACTCCTGTCTTGGCTACGTGCATACCGGATTGAGCCATGCTTTCGCT
CTGCCTATCCGAACCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MRRVFRLLAVVLDAIVGVAEDKPDKRYMSVYEAQDKLDNGLITIREYNEAFESKDVL

Sequences:

>Translated_57_residues
MRRVFRLLAVVLDAIVGVAEDKPDKRYMSVYEAQDKLDNGLITIREYNEAFESKDVL
>Mature_57_residues
MRRVFRLLAVVLDAIVGVAEDKPDKRYMSVYEAQDKLDNGLITIREYNEAFESKDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6605; Mature: 6605

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVFRLLAVVLDAIVGVAEDKPDKRYMSVYEAQDKLDNGLITIREYNEAFESKDVL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRVFRLLAVVLDAIVGVAEDKPDKRYMSVYEAQDKLDNGLITIREYNEAFESKDVL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA