Click here to switch to the map view.

The map label for this gene is 54293956

Identifier: 54293956

GI number: 54293956

Start: 1145355

End: 1146254

Strand: Reverse

Name: 54293956

Synonym: lpl1013

Alternate gene names: NA

Gene position: 1146254-1145355 (Counterclockwise)

Preceding gene: 54293957

Following gene: 54293954

Centisome position: 34.26

GC content: 37.67

Gene sequence:

>900_bases
ATGAGTAAGTCCAAACTTAAAAATGCACAGTATTCCATCAATGAATGTATTAAGAAAATCCAAAACTACTCCCACGCCAG
CCGAGCAGATATGAAACACATGTTGAATCGCTGTGTCAAAGACCTACACGAGCTAGGTTATATGGTAACACACATAAAAG
GATTAAAACCAAAACACATATATATCCTGGTTGATTACTGGAAAGAACAGAATAAAAATCCCGCAACAATTAAAAATTAC
ATGGCTAAACTGCGAAAAGTAGCCTCAGTGCTAAACAAGCCAGAACTGGTCAAAGAAGGCAACGACAACTATAAAATCAA
TGAACGAAATTATGCCCCTCAATATAATAAAGCAATCAATAATGTCGATTTTTCTAAATGCTCAGACCCAATGATCCGTT
TATCCCTAGAAGCCCAATCTCTTTTCGGTCTACGCCGTGAAGAATCTATGAAAATTGTACTCAGTGACGCCTGGCAAGGA
AATAAATTGGTTATAAAGCCCAGCTGGACAAAAGGTGGAATTGGACGAGATATTAAACTCACTAATGAACAACAACGACA
ATGGCTTATCAACGCTATAAAGCAAGTTCCTGCTGGACAATCCCTCATTCCCAAAGAAAAGACCTATAAAAATCATCTAG
CTCAGTATCATGAAGTGATAGCAAAAATGGGGTTAAGCAAATGCCATGGACTTCGTCATGCTTATGCCCAGAGAAGATAT
ATTGAAATTACAAAGTCATATGACAAAACAGGTAAAGGCCTTATATGCCCAATACAAGGAGGTAGAATTTACAAAGAGCT
TAATCCTCTTGAGAAATATTGGGATAGGACTGCAAGGGAAATTATTAGCCAATCACTTGGGCATTCGAGATTAAGTGTTA
CGAAGATCTACCTTGGTTAA

Upstream 100 bases:

>100_bases
TATCAGTATCTTTTGCCCATATTAGGCAAGTATGAAACCTATTGGGTTATTCGCACCGAAATGGGCATCAAATCCCGTGA
TTCTTTATGGAGGTATCTCA

Downstream 100 bases:

>100_bases
CCATATGTAGCAATAAAAAAGCAGCTTATTTTAATAAGCTGCTCCAAATACACGCTAGTGTATTGCAGGGAAGTCTTCCC
ATCCAGAATACATAGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein; Integrase Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMVTHIKGLKPKHIYILVDYWKEQNKNPATIKNY
MAKLRKVASVLNKPELVKEGNDNYKINERNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSDAWQG
NKLVIKPSWTKGGIGRDIKLTNEQQRQWLINAIKQVPAGQSLIPKEKTYKNHLAQYHEVIAKMGLSKCHGLRHAYAQRRY
IEITKSYDKTGKGLICPIQGGRIYKELNPLEKYWDRTAREIISQSLGHSRLSVTKIYLG

Sequences:

>Translated_299_residues
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMVTHIKGLKPKHIYILVDYWKEQNKNPATIKNY
MAKLRKVASVLNKPELVKEGNDNYKINERNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSDAWQG
NKLVIKPSWTKGGIGRDIKLTNEQQRQWLINAIKQVPAGQSLIPKEKTYKNHLAQYHEVIAKMGLSKCHGLRHAYAQRRY
IEITKSYDKTGKGLICPIQGGRIYKELNPLEKYWDRTAREIISQSLGHSRLSVTKIYLG
>Mature_298_residues
SKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMVTHIKGLKPKHIYILVDYWKEQNKNPATIKNYM
AKLRKVASVLNKPELVKEGNDNYKINERNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSDAWQGN
KLVIKPSWTKGGIGRDIKLTNEQQRQWLINAIKQVPAGQSLIPKEKTYKNHLAQYHEVIAKMGLSKCHGLRHAYAQRRYI
EITKSYDKTGKGLICPIQGGRIYKELNPLEKYWDRTAREIISQSLGHSRLSVTKIYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34605; Mature: 34474

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMVTHIKGLKPKHI
CCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YILVDYWKEQNKNPATIKNYMAKLRKVASVLNKPELVKEGNDNYKINERNYAPQYNKAIN
EEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHHHHC
NVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSDAWQGNKLVIKPSWTKGGIGRDIKL
CCCHHHCCCCEEEEEECHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEE
TNEQQRQWLINAIKQVPAGQSLIPKEKTYKNHLAQYHEVIAKMGLSKCHGLRHAYAQRRY
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEITKSYDKTGKGLICPIQGGRIYKELNPLEKYWDRTAREIISQSLGHSRLSVTKIYLG
HHHHHHHCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMVTHIKGLKPKHI
CHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YILVDYWKEQNKNPATIKNYMAKLRKVASVLNKPELVKEGNDNYKINERNYAPQYNKAIN
EEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHHHHC
NVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSDAWQGNKLVIKPSWTKGGIGRDIKL
CCCHHHCCCCEEEEEECHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEE
TNEQQRQWLINAIKQVPAGQSLIPKEKTYKNHLAQYHEVIAKMGLSKCHGLRHAYAQRRY
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEITKSYDKTGKGLICPIQGGRIYKELNPLEKYWDRTAREIISQSLGHSRLSVTKIYLG
HHHHHHHCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA