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The map label for this gene is 54293937

Identifier: 54293937

GI number: 54293937

Start: 1123190

End: 1124035

Strand: Direct

Name: 54293937

Synonym: lpl0993

Alternate gene names: NA

Gene position: 1123190-1124035 (Clockwise)

Preceding gene: 54293935

Following gene: 54293938

Centisome position: 33.57

GC content: 37.12

Gene sequence:

>846_bases
ATGGATAAGTTATACCAATATCTTTTACTTCTTCGTCTATCGCACTGGAGTAAGGCAATTTTTGTTATGCTCGGTTTCAT
TTATACTCCTGTTCCAGGGTATTTGTTTCCGGCATTAATGGCTTCATTATCTTTTTGTCTTATTGCAAGTGCCGTTTATA
TTTATAATGATATTCAGGATAGAACGGAAGACAGTCTGCATCCCTTTAAATGCAACAGACCTATAGCCAGCGAGCAGGTC
ACTTTATTTGATGCGATCATTGTAATGCTTTTATTGATGGTTGCTGGAATCGTGCTGGGTTGGCTTATTTCAAAAAAACT
GGTGGTCATTTTAATTATTTATTTGATAATCAATCTTGCTTATAACCATGTTTTAAAATTGATTCCGGTTTTTGATGTCG
CTTGTATTGCCCTGGGATTTATGCTCAGAGTTTTGGCCGGAACAATAGGAATTGATTTGGTTATATCAGCCTGGTTAACT
GTTGCAGCGACTTTGCTTAGTTTATTTATCGCCCTAAATAAAAGGCAACTGGAAATGCAGTTAGGATTGAAAAATTCAAC
CCGTAAGGTTCTACGCCGATATAATCCAGCCTTTCTGCAAAGGCTTATCGTCATTACAGGAATAGCCTGCTTTATTACTT
ATCTGTTTTACACGGTTTATGCCAGAGCAGAATCGTTTTTTTTCATTTTAACTTTACCTTTTGCTGCTATTGCACTATGG
CGTTTTGCCTGGCTTGCCACTCAGGATGTAGAGAATGATGATCCGGTCAATATTTTTTTAAGTGATCGATTATCTCGAAT
TAATTTATGGTGCTTCGCTATCCTGACCTTTATGGCATTGAATTGA

Upstream 100 bases:

>100_bases
AATACTTTGATTAGAAATGACAGAACTGTTTTAGCTGTTTTTGAGAAAAGGGTAGATTTGTATGATGGAATTAGCAAATA
AAATCATCAGGGTAAGTTAC

Downstream 100 bases:

>100_bases
TGAGTGCTAAGTGGGGCTGGTATGACAGCCTGTTTATCGTTTTGTTTGCTTATTTGCTGGTTTTACAAATCCAGGCCATA
TGGCCGTTCACTATAGATGA

Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDKLYQYLLLLRLSHWSKAIFVMLGFIYTPVPGYLFPALMASLSFCLIASAVYIYNDIQDRTEDSLHPFKCNRPIASEQV
TLFDAIIVMLLLMVAGIVLGWLISKKLVVILIIYLIINLAYNHVLKLIPVFDVACIALGFMLRVLAGTIGIDLVISAWLT
VAATLLSLFIALNKRQLEMQLGLKNSTRKVLRRYNPAFLQRLIVITGIACFITYLFYTVYARAESFFFILTLPFAAIALW
RFAWLATQDVENDDPVNIFLSDRLSRINLWCFAILTFMALN

Sequences:

>Translated_281_residues
MDKLYQYLLLLRLSHWSKAIFVMLGFIYTPVPGYLFPALMASLSFCLIASAVYIYNDIQDRTEDSLHPFKCNRPIASEQV
TLFDAIIVMLLLMVAGIVLGWLISKKLVVILIIYLIINLAYNHVLKLIPVFDVACIALGFMLRVLAGTIGIDLVISAWLT
VAATLLSLFIALNKRQLEMQLGLKNSTRKVLRRYNPAFLQRLIVITGIACFITYLFYTVYARAESFFFILTLPFAAIALW
RFAWLATQDVENDDPVNIFLSDRLSRINLWCFAILTFMALN
>Mature_281_residues
MDKLYQYLLLLRLSHWSKAIFVMLGFIYTPVPGYLFPALMASLSFCLIASAVYIYNDIQDRTEDSLHPFKCNRPIASEQV
TLFDAIIVMLLLMVAGIVLGWLISKKLVVILIIYLIINLAYNHVLKLIPVFDVACIALGFMLRVLAGTIGIDLVISAWLT
VAATLLSLFIALNKRQLEMQLGLKNSTRKVLRRYNPAFLQRLIVITGIACFITYLFYTVYARAESFFFILTLPFAAIALW
RFAWLATQDVENDDPVNIFLSDRLSRINLWCFAILTFMALN

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 32024; Mature: 32024

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]