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The map label for this gene is rmuC [H]

Identifier: 54293928

GI number: 54293928

Start: 1107761

End: 1109023

Strand: Reverse

Name: rmuC [H]

Synonym: lpl0984

Alternate gene names: 54293928

Gene position: 1109023-1107761 (Counterclockwise)

Preceding gene: 54293929

Following gene: 54293927

Centisome position: 33.15

GC content: 38.32

Gene sequence:

>1263_bases
ATGGCATTATTTTCTTCTGTCACTTTGTTTGAGGGCATAGCGTTGGCTATTGCCTTTCAATTCTTATTGCTTTTCTGGGT
TTTGGTAAAACAAGCACAGCAAAAAAAACTGACCGAACAACTTGGTGAAAGAATACAACAAACACTAATCTCTCAACTTC
ACCAGTTACATATTGATTTAAGCCAATCATATCAAACGAGCCAACAATTTATTAATGAAAAGATAGCTCAAGGACAACTG
GCTACACAACAGCTCATTAGTGATGCCATACAAAGACAAATGGCAGATGTCAGAGAGCAAATGACTCATAGCTTCAAACA
TCATGCGAGCTCACTCACTTCTCACTTACAATTACTAACTGAGGAAATTCGTAATCATTTAAACACACTAACTCAGCAGG
TTAATCACAAATTGACCGAAGGTTTTGAGAAAACTTCGTCTACTTTTATTGACGTGGTAAAGCGATTAACCATCATTGAT
GAGGCACAAAAGAAAATCACTGAACTCTCCAGTCATGTTGTCAGCCTTCAGGACGTATTAGTAGACAAAAAAGCTCGCGG
TGCTTTTGGTGAAGTTCAATTATCAACACTCATCAGCAATATGCTTCCCAGCGCAAGTTATCAAATGCAATATACCCTCA
GTAATCAAAAACGGGCTGACTGTGTTTTGTTCTTACCCGAGCCCACTGGAAATATTGTCATAGACGCCAAATTTCCCCTG
GAAACTTATCAACGATTAATCAACAGTGATGCCTTATCCACTGATCGTAAGTCATTACAACAACAATTTCGCCAAGACAT
TCAAAAGCATATTAAGGACATCGCTGAAAAATATATCGTGCCCAATGAAACAACAGATGGCGCCATGATGTTTATTCCTG
CAGAATCTATATTTGCTGAGATTCATGCAAACTATCCTGATTTAATTGCCATGTCTCAAAAGCTAAAAGTCTGGCTGGTA
TCGCCTAGCACATTAATGGCTGTACTGACTACAGCAAGGGCAGTACTTAAAGATGATGCAACTCGCAAACAAGTACATAT
CATTCAAAAACATCTTCAAGCCCTGGCCAATGATTTTCAACGCTTTGAAAAGAGAATGGATAAATTATCCAAACACATTG
ACTTGGCACATCAGGACGTTAATGAAGTCAATACATCAGCCAAAAAGATCACTTCCAGATTCCAAAAAATTGAATCGGTC
GATATCGAATTGGATGAACACGAAGTAACTCAATTAGAATTGGTCGAGTCTGAATCCATCTAA

Upstream 100 bases:

>100_bases
CCTCTATTTGGGTTATTTACGCTTGATAGACTATGGGCAGTTAAAAACTGTGTATCAATACAACCAACCTGTCAAGCTTA
GTCAGTTAGTGGATTAATGA

Downstream 100 bases:

>100_bases
AATAAAATCTTTATGGTGCAGAATACCTAATTTAGCATTATACTAAGCGGTTTTCAGTTTTAATCATTAAATGCCAATGA
ATACAAAAACGCTACTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQLGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQL
ATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIID
EAQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLV
SPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESV
DIELDEHEVTQLELVESESI

Sequences:

>Translated_420_residues
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQLGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQL
ATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIID
EAQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLV
SPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESV
DIELDEHEVTQLELVESESI
>Mature_419_residues
ALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQLGERIQQTLISQLHQLHIDLSQSYQTSQQFINEKIAQGQLA
TQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDE
AQKKITELSSHVVSLQDVLVDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPLE
TYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLVS
PSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVD
IELDEHEVTQLELVESESI

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=423, Percent_Identity=25.0591016548463, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47902; Mature: 47770

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQLGERIQQTLISQLHQLHIDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYQTSQQFINEKIAQGQLATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDEAQKKITELSSHVVSLQDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCH
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
IHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQ
HHCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVDIELDEHEVTQLELVESESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALFSSVTLFEGIALAIAFQFLLLFWVLVKQAQQKKLTEQLGERIQQTLISQLHQLHIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQSYQTSQQFINEKIAQGQLATQQLISDAIQRQMADVREQMTHSFKHHASSLTSHLQLLT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTIIDEAQKKITELSSHVVSLQDVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDKKARGAFGEVQLSTLISNMLPSASYQMQYTLSNQKRADCVLFLPEPTGNIVIDAKFPL
HHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEECCCH
ETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEKYIVPNETTDGAMMFIPAESIFAE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHH
IHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDATRKQVHIIQKHLQALANDFQ
HHCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFEKRMDKLSKHIDLAHQDVNEVNTSAKKITSRFQKIESVDIELDEHEVTQLELVESESI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]