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The map label for this gene is pilO

Identifier: 54293904

GI number: 54293904

Start: 1074096

End: 1074695

Strand: Direct

Name: pilO

Synonym: lpl0960

Alternate gene names: NA

Gene position: 1074096-1074695 (Clockwise)

Preceding gene: 54293903

Following gene: 54293905

Centisome position: 32.1

GC content: 39.67

Gene sequence:

>600_bases
ATGGACACGGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGGCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGTATCAGTATACTGATAATTGGATTAGGATATTGGCTTATTGTTAAGCCCAATTTTGAGCAATTGGAAATACAGGAAG
CCCAGGAAGTTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCTTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGGACTATGCTAAAACAACTCCCGGCGAAAAATGAAATGCCAGGGCTTTTGGAGGAAAT
ATCTAAAACGGGGATTGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTGGCAAGATTTTTAAGTCGTGTGGCTGAAATGAACAGA
ATAGTGACTTTGCATGAATTTAGTGTTGAGGGGGTGTCATCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGCTATCACTGCGAAAATATACAGATATCGGGCACAATGA

Upstream 100 bases:

>100_bases
CTAACTGAAATTAAAAAAAATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAA
ATATTAGGCTGATAAAAATC

Downstream 100 bases:

>100_bases
TAATTAAAAATAACCAGACGCTTATATTAGGCTTTTTCGGAAATTCTCTGCGTGTTTCACTCACAGCAGCGACTTTCCGA
AAAAGCCTATTGATGGGGTT

Product: Tfp pilus assembly protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Fimbrial Assembly Protein PilO; Type IV Pilus Assembly Protein PilO; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ

Sequences:

>Translated_199_residues
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ
>Mature_199_residues
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMAITAKIYRYRAQ

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22483; Mature: 22483

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALK
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
TEFEKKQHQAANLQAYRNQLQLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEE
FAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNRIVTLHEFSVEGVSSGDGKTV
ECCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
SQDELVMAITAKIYRYRAQ
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLEIQEAQEVALK
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHH
TEFEKKQHQAANLQAYRNQLQLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEE
FAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNRIVTLHEFSVEGVSSGDGKTV
ECCCHHHHHHHHEECCEEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
SQDELVMAITAKIYRYRAQ
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA