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The map label for this gene is ycaC [C]

Identifier: 54293880

GI number: 54293880

Start: 1050279

End: 1050824

Strand: Direct

Name: ycaC [C]

Synonym: lpl0936

Alternate gene names: 54293880

Gene position: 1050279-1050824 (Clockwise)

Preceding gene: 54293879

Following gene: 54293881

Centisome position: 31.39

GC content: 36.63

Gene sequence:

>546_bases
ATGTTACTAAATAGAGCGGATTCTCTTTTGGTCTTGATTGATGTACAGGAAAAACTAACCCTGGCAATATTAAATCTCGA
TCTTTTTTTAGCTCGATGTGAATGGTTGCTAAAATTAGCCAGAAAACTGGACGTGCCTGTTCTAGCCAGTGAACAATACC
CTAAAGGTTTAGGTCGAACCGTTTCTCCTTTAAGCTCTTATATTAATCAAGAAGAATGCATTGAAAAAATTCATTTCTCA
TGCATGCAAGAACCACAATATATTAACCTCCTGAAAAGATATAATAAAAACCAGCTTATTCTTATCGGAATTGAGGCTCA
TGTATGTGTGCTTCAAACGGCCATAGAAATGAAGGGCTATGGATTCGATGTCTTTGTTGTTGTGGATGGTGTGAGCAGCC
GTTCTGAGTTTGATTTAAAATACGGTCTAAAAAGGATGAAACAGAATGGGATCCATTTGATAACAGCTGAAATGGTACTG
TTCGAGTGGTTAAAACAAGCAGGTACACCAGAATTTAAAGCGATTAGCAAAGAATTTTTACAATAG

Upstream 100 bases:

>100_bases
CTATTATTCCCCCGGAAAAGAATAATGCATCAATCCGGGGTTCACTCACTTTTCTTAATGCTATATGATATAGTTCAATA
AATAGAATGAGGCTATCAGG

Downstream 100 bases:

>100_bases
GCTATTTGCATGGCCTGATTATCTCCTTTTATTGCTGTGTTGCAAACGTTTCTGCGGTACTGATTTACTGTATGTAAGCT
TCCTTACTCAAAGCGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Isochorismatase; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLLNRADSLLVLIDVQEKLTLAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKRYNKNQLILIGIEAHVCVLQTAIEMKGYGFDVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ

Sequences:

>Translated_181_residues
MLLNRADSLLVLIDVQEKLTLAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKRYNKNQLILIGIEAHVCVLQTAIEMKGYGFDVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ
>Mature_181_residues
MLLNRADSLLVLIDVQEKLTLAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRTVSPLSSYINQEECIEKIHFS
CMQEPQYINLLKRYNKNQLILIGIEAHVCVLQTAIEMKGYGFDVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVL
FEWLKQAGTPEFKAISKEFLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=172, Percent_Identity=37.7906976744186, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI103471987, Length=173, Percent_Identity=34.1040462427746, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI13376007, Length=188, Percent_Identity=34.5744680851064, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17540156, Length=176, Percent_Identity=38.6363636363636, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI19922924, Length=178, Percent_Identity=30.8988764044944, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21357489, Length=175, Percent_Identity=33.7142857142857, Blast_Score=91, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20736; Mature: 20736

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNRADSLLVLIDVQEKLTLAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRT
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
VSPLSSYINQEECIEKIHFSCMQEPQYINLLKRYNKNQLILIGIEAHVCVLQTAIEMKGY
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
GFDVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVLFEWLKQAGTPEFKAISKEFL
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHC
Q
C
>Mature Secondary Structure
MLLNRADSLLVLIDVQEKLTLAILNLDLFLARCEWLLKLARKLDVPVLASEQYPKGLGRT
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCH
VSPLSSYINQEECIEKIHFSCMQEPQYINLLKRYNKNQLILIGIEAHVCVLQTAIEMKGY
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
GFDVFVVVDGVSSRSEFDLKYGLKRMKQNGIHLITAEMVLFEWLKQAGTPEFKAISKEFL
CEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA