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The map label for this gene is 54293806

Identifier: 54293806

GI number: 54293806

Start: 979332

End: 980672

Strand: Direct

Name: 54293806

Synonym: lpl0862

Alternate gene names: NA

Gene position: 979332-980672 (Clockwise)

Preceding gene: 54293805

Following gene: 54293816

Centisome position: 29.27

GC content: 40.42

Gene sequence:

>1341_bases
ATGGAAATAAAAAGGGTGCTTAAGGACCGTCTGACTGCTCGTGTTTGTGTTATCGGTGCTGGTCCCAGCGGTATTGCTGC
CATTAAAAATTTGCAAGAACACGGCATTACTAATGTTACTGTTTTTGAAAAAAACAATCAAATAGGTGGAAACTGGGTTT
ACGATGAGCAAAATGAGCATTCCAGCGTTTATGAGACGACCCATATCATCAGTTCAAAACGCTGGTCTGAGTTTGAAGAT
TTCCCTATGCCTGTTGATTACCCGGATTATCCTTCACACTCCCAGCTTTTAAAATATTTTCAGAGTTATGTGGAGCATTT
TCATTTAGATAGATACATTCGTTTTAACACAGTGGTACAAAAGGTACATCGACTTGATGATGATACATGGCATGTTATCT
ATGAGGATGCCCAAGGAATTCATGAAGCGTGCTATGACTATTTGCTGGTAGCAAATGGTCATCATTGGGATCCCTTTATG
CCTGTATATCCTGGAGTATTTGACGGGGAGATACTTCATTCTCACCAATATAAAAAAGCTTCAATTTTTAAAGGCAAGCG
AGTACTGGTTGTTGGTGGGGGTAATTCAGCCTGTGATGTCGCTGTTGAAATATCGCGGGTTGCTCCCGGAACTTGCATTA
GCATGCGTAGAGGGTATCATATTTTCCCCAAATTTATTTTTGGTAAACCAACAGACGTAGCAGTCGCTAAAATACAATGG
ATGCCATCCTGGCTAAGGCAGAAGTTCATCAGCCTGGTCATTAGAGGATTGCAAGGTCGGTATGCCAAGTACAAATTAAT
GAAGCCTGATTGTGGGCCATTGGAAATTCATCCTACTATTAACTCCGAACTCTTGTATTTTATTCGCCATGGCAAAATAC
ACCCTCGTCCCGGTATATCGAGATTTGAGGGCAACACCGTTCATTTTACTGATGGAACCCAGGGGGAGTTCGATACGATC
ATTTTCGCTACGGGTTACCAAATTAGTTTTCCATTTTTTGATAAAAGTTGTATTGATTTTAGTAACTCTACCACCATCCC
TTTATATCGAAAAATGATGCACCCCGAGTTTGAAAATTTGTATTTCATTGGCCTATGCCAGCCTCAAGGTTGCATTTGGC
CTTTGGCTGATTATCAATCAAAAATAGTGGCTCGCATTATTGCAGGGACTTTGAAACGACCTGAGCAATTACATCGAAAA
ATAGCCAAAGAAATCAATAAACCCCATCACCGATTTAAATCGCACATGCGCCATGCCTTAGAGGTCGATTATCATATTTT
CAGAAAAGAATTGTTAGAAATGCTAGGCCAAAAACATAAGAGACTGAAATTCTATCCCTAG

Upstream 100 bases:

>100_bases
GTTGATTCGATAAAAGGGATAAAAGTAAATCATTTTACAATTGACAAAGACGAAATTTTACAAGCGATGATAATGGATAA
AGTTGATAAGGTGTTAGTTG

Downstream 100 bases:

>100_bases
ATTCGTAATGAGTACATGAATGTTAAAGCATGGAAGATCACATGAATTATAAGCCTGATTACACCTATTCTGTTTTGAAA
GCCGGACACAATTTACAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MEIKRVLKDRLTARVCVIGAGPSGIAAIKNLQEHGITNVTVFEKNNQIGGNWVYDEQNEHSSVYETTHIISSKRWSEFED
FPMPVDYPDYPSHSQLLKYFQSYVEHFHLDRYIRFNTVVQKVHRLDDDTWHVIYEDAQGIHEACYDYLLVANGHHWDPFM
PVYPGVFDGEILHSHQYKKASIFKGKRVLVVGGGNSACDVAVEISRVAPGTCISMRRGYHIFPKFIFGKPTDVAVAKIQW
MPSWLRQKFISLVIRGLQGRYAKYKLMKPDCGPLEIHPTINSELLYFIRHGKIHPRPGISRFEGNTVHFTDGTQGEFDTI
IFATGYQISFPFFDKSCIDFSNSTTIPLYRKMMHPEFENLYFIGLCQPQGCIWPLADYQSKIVARIIAGTLKRPEQLHRK
IAKEINKPHHRFKSHMRHALEVDYHIFRKELLEMLGQKHKRLKFYP

Sequences:

>Translated_446_residues
MEIKRVLKDRLTARVCVIGAGPSGIAAIKNLQEHGITNVTVFEKNNQIGGNWVYDEQNEHSSVYETTHIISSKRWSEFED
FPMPVDYPDYPSHSQLLKYFQSYVEHFHLDRYIRFNTVVQKVHRLDDDTWHVIYEDAQGIHEACYDYLLVANGHHWDPFM
PVYPGVFDGEILHSHQYKKASIFKGKRVLVVGGGNSACDVAVEISRVAPGTCISMRRGYHIFPKFIFGKPTDVAVAKIQW
MPSWLRQKFISLVIRGLQGRYAKYKLMKPDCGPLEIHPTINSELLYFIRHGKIHPRPGISRFEGNTVHFTDGTQGEFDTI
IFATGYQISFPFFDKSCIDFSNSTTIPLYRKMMHPEFENLYFIGLCQPQGCIWPLADYQSKIVARIIAGTLKRPEQLHRK
IAKEINKPHHRFKSHMRHALEVDYHIFRKELLEMLGQKHKRLKFYP
>Mature_446_residues
MEIKRVLKDRLTARVCVIGAGPSGIAAIKNLQEHGITNVTVFEKNNQIGGNWVYDEQNEHSSVYETTHIISSKRWSEFED
FPMPVDYPDYPSHSQLLKYFQSYVEHFHLDRYIRFNTVVQKVHRLDDDTWHVIYEDAQGIHEACYDYLLVANGHHWDPFM
PVYPGVFDGEILHSHQYKKASIFKGKRVLVVGGGNSACDVAVEISRVAPGTCISMRRGYHIFPKFIFGKPTDVAVAKIQW
MPSWLRQKFISLVIRGLQGRYAKYKLMKPDCGPLEIHPTINSELLYFIRHGKIHPRPGISRFEGNTVHFTDGTQGEFDTI
IFATGYQISFPFFDKSCIDFSNSTTIPLYRKMMHPEFENLYFIGLCQPQGCIWPLADYQSKIVARIIAGTLKRPEQLHRK
IAKEINKPHHRFKSHMRHALEVDYHIFRKELLEMLGQKHKRLKFYP

Specific function: Unknown

COG id: COG2072

COG function: function code P; Predicted flavoprotein involved in K+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503755, Length=453, Percent_Identity=33.7748344370861, Blast_Score=215, Evalue=5e-56,
Organism=Homo sapiens, GI221316672, Length=457, Percent_Identity=32.6039387308534, Blast_Score=215, Evalue=8e-56,
Organism=Homo sapiens, GI4503757, Length=448, Percent_Identity=32.1428571428571, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI221316674, Length=427, Percent_Identity=33.0210772833724, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI50541965, Length=448, Percent_Identity=33.4821428571429, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI50541961, Length=448, Percent_Identity=33.4821428571429, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI4503759, Length=439, Percent_Identity=31.6628701594533, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI221316678, Length=231, Percent_Identity=38.0952380952381, Blast_Score=138, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25145785, Length=454, Percent_Identity=32.15859030837, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI25150462, Length=446, Percent_Identity=31.390134529148, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17555726, Length=445, Percent_Identity=32.5842696629214, Blast_Score=204, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17541300, Length=444, Percent_Identity=31.981981981982, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17561948, Length=445, Percent_Identity=31.0112359550562, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI193202226, Length=222, Percent_Identity=32.8828828828829, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17506045, Length=218, Percent_Identity=34.4036697247706, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6321970, Length=188, Percent_Identity=28.7234042553192, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19921694, Length=212, Percent_Identity=35.8490566037736, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI19922866, Length=233, Percent_Identity=33.4763948497854, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR000103 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 51829; Mature: 51829

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKRVLKDRLTARVCVIGAGPSGIAAIKNLQEHGITNVTVFEKNNQIGGNWVYDEQNEH
CCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCC
SSVYETTHIISSKRWSEFEDFPMPVDYPDYPSHSQLLKYFQSYVEHFHLDRYIRFNTVVQ
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVHRLDDDTWHVIYEDAQGIHEACYDYLLVANGHHWDPFMPVYPGVFDGEILHSHQYKKA
HHHHCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHH
SIFKGKRVLVVGGGNSACDVAVEISRVAPGTCISMRRGYHIFPKFIFGKPTDVAVAKIQW
HCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEHHCCCCEECCHHHCCCCCCCEEEEEHH
MPSWLRQKFISLVIRGLQGRYAKYKLMKPDCGPLEIHPTINSELLYFIRHGKIHPRPGIS
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHEEHHHCCCCCCCCCCC
RFEGNTVHFTDGTQGEFDTIIFATGYQISFPFFDKSCIDFSNSTTIPLYRKMMHPEFENL
CCCCCEEEECCCCCCCCEEEEEEECCEEECCCCCCHHHCCCCCCCHHHHHHHHCCCCCCE
YFIGLCQPQGCIWPLADYQSKIVARIIAGTLKRPEQLHRKIAKEINKPHHRFKSHMRHAL
EEEEEECCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
EVDYHIFRKELLEMLGQKHKRLKFYP
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEIKRVLKDRLTARVCVIGAGPSGIAAIKNLQEHGITNVTVFEKNNQIGGNWVYDEQNEH
CCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCC
SSVYETTHIISSKRWSEFEDFPMPVDYPDYPSHSQLLKYFQSYVEHFHLDRYIRFNTVVQ
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVHRLDDDTWHVIYEDAQGIHEACYDYLLVANGHHWDPFMPVYPGVFDGEILHSHQYKKA
HHHHCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHH
SIFKGKRVLVVGGGNSACDVAVEISRVAPGTCISMRRGYHIFPKFIFGKPTDVAVAKIQW
HCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEHHCCCCEECCHHHCCCCCCCEEEEEHH
MPSWLRQKFISLVIRGLQGRYAKYKLMKPDCGPLEIHPTINSELLYFIRHGKIHPRPGIS
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCHHHEEHHHCCCCCCCCCCC
RFEGNTVHFTDGTQGEFDTIIFATGYQISFPFFDKSCIDFSNSTTIPLYRKMMHPEFENL
CCCCCEEEECCCCCCCCEEEEEEECCEEECCCCCCHHHCCCCCCCHHHHHHHHCCCCCCE
YFIGLCQPQGCIWPLADYQSKIVARIIAGTLKRPEQLHRKIAKEINKPHHRFKSHMRHAL
EEEEEECCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
EVDYHIFRKELLEMLGQKHKRLKFYP
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA