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The map label for this gene is 54293797

Identifier: 54293797

GI number: 54293797

Start: 969406

End: 970656

Strand: Direct

Name: 54293797

Synonym: lpl0853

Alternate gene names: NA

Gene position: 969406-970656 (Clockwise)

Preceding gene: 54293796

Following gene: 54293802

Centisome position: 28.97

GC content: 36.13

Gene sequence:

>1251_bases
GTGCGATTAACCATAATGGATACCAAGGGTATTTTATTAGCTCCTTTTTTCTTTATTTCATTTATGTTTTTTATTCCGAT
CAGTCCTACGATAAAGTCTATTTGTTTCATTTGCAGTTTAATTGCCGTATTGATTACTCCACAATACAGAAAACATATTG
TTTATGCTTATAATACTTTGTGGGGACGCGCTGCATTTTGTTTGTTTCTCTTTGTCGTTATTGCAAGTTTATGGAGTCTC
GCTCCTTATTCAATGCAATGGATGGTCATTGGCAAATATTGTAAATTAATTTATCTTCCCATTTTAGCTACAGGTTTTAT
TAATCCCAAAGTAAGAAACTGGAGTATCAATAGTTATTTGGCTGCTATTTTTATTACTTGTGTTATTTCCATCTTAAAGG
CTAAAAATATTATTGCGTCAGAAGATCCGGGCGAGGTTTTCTACAATCATATTATTACCGGTTTTATGGTGGCATTGGCA
GCCTATTTAACAGGATTGCTGGCTTTTCAAAGTTCGGGCTGGTTACGACTTATTTATATCTTCATGATGATACTAACCAG
TTACCAAGTGCTTTTTATAAATACTGGAAGAACGGGTTATTTGGTCTACTTTATTTTGATGTTATTGCTTTTGATACAAA
AATTAAACTTCAAACAGGCTTTAGCAGGGATTGTTCTCTTCAGCGGCATCATTGCTTTGGCATATCATCATAGCCCTGTA
ATGCAAACCAGAATTTATGATTTAATTCAGGATATCAAGTTATTAAAACAACATAATAAAAATACATCGATAGGCTATAG
AATGCAGTTTCATCATTATGCCAAGCAATTGATGATGCAACATCCTCTTATTGGAATAGGTACAGGCGGATTTAAATACA
GTTACTCACGAGACATTCCTGTTCCCAGTTGGGGTAAAGAGCTGACGGACCCACACAGTCAGTACTGGATGACTTTAGCG
GAGCAAGGGTTAATTGGCCTCGGGCTTTTAGTTATATTTTTAGCGAGTTTGTTTATTACATCGTTTCAATTGACTAGCTC
CAGACCTATTCTTTTAGGCGTTTTATTTTCTTTTTGTATAGGTTCCATTTCCGACACGATTTTATGCTATTCGACTGCAG
GTTATTTGTTGGTAGTGATGAGTGCCTTATGTTTTGGTGAGTTAATTGAGAAGCGTAGAGTCAAGGACGTAGAAGAAGAC
CATCCTGCTCCTTTATCAGCCCATGCTCCAGCAGCAATAAGTCAGACCTAA

Upstream 100 bases:

>100_bases
TTGGGGCGCAAGGCGCTTTTTATCGCGGGGTCAAACAAATATATAAAGACAGGGATATCAATAAATTACCCAGTGTAAAT
CAAATAAAAGAGGAATAATC

Downstream 100 bases:

>100_bases
TCAATAAACAGAAATTTGCTCAACAGGTTTTTGCAATGAACATTCTTCCGAAACATAGCCGTCATTGCAAACCACAAGAC
CTGATGAATTTAATTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Polymerase; O-Antigen Ligase; Lipid A Core -O-Antigen Ligase; Inner Membrane Protein

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSL
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLTGLLAFQSSGWLRLIYIFMMILTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMMQHPLIGIGTGGFKYSYSRDIPVPSWGKELTDPHSQYWMTLA
EQGLIGLGLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDVEED
HPAPLSAHAPAAISQT

Sequences:

>Translated_416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSL
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLTGLLAFQSSGWLRLIYIFMMILTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMMQHPLIGIGTGGFKYSYSRDIPVPSWGKELTDPHSQYWMTLA
EQGLIGLGLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDVEED
HPAPLSAHAPAAISQT
>Mature_416_residues
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTLWGRAAFCLFLFVVIASLWSL
APYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYLAAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALA
AYLTGLLAFQSSGWLRLIYIFMMILTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMMQHPLIGIGTGGFKYSYSRDIPVPSWGKELTDPHSQYWMTLA
EQGLIGLGLLVIFLASLFITSFQLTSSRPILLGVLFSFCIGSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDVEED
HPAPLSAHAPAAISQT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46974; Mature: 46974

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTL
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGRAAFCLFLFVVIASLWSLAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTGLLAFQSSGWLRLIYI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FMMILTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMMQHPLIGIGTGGFKYSYSRDIP
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCC
VPSWGKELTDPHSQYWMTLAEQGLIGLGLLVIFLASLFITSFQLTSSRPILLGVLFSFCI
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDVEEDHPAPLSAHAPAAISQT
HHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLTIMDTKGILLAPFFFISFMFFIPISPTIKSICFICSLIAVLITPQYRKHIVYAYNTL
CEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WGRAAFCLFLFVVIASLWSLAPYSMQWMVIGKYCKLIYLPILATGFINPKVRNWSINSYL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
AAIFITCVISILKAKNIIASEDPGEVFYNHIITGFMVALAAYLTGLLAFQSSGWLRLIYI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FMMILTSYQVLFINTGRTGYLVYFILMLLLLIQKLNFKQALAGIVLFSGIIALAYHHSPV
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
MQTRIYDLIQDIKLLKQHNKNTSIGYRMQFHHYAKQLMMQHPLIGIGTGGFKYSYSRDIP
HHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCC
VPSWGKELTDPHSQYWMTLAEQGLIGLGLLVIFLASLFITSFQLTSSRPILLGVLFSFCI
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
GSISDTILCYSTAGYLLVVMSALCFGELIEKRRVKDVEEDHPAPLSAHAPAAISQT
HHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA