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The map label for this gene is 54293753

Identifier: 54293753

GI number: 54293753

Start: 914612

End: 915703

Strand: Reverse

Name: 54293753

Synonym: lpl0809

Alternate gene names: NA

Gene position: 915703-914612 (Counterclockwise)

Preceding gene: 54293754

Following gene: 54293752

Centisome position: 27.37

GC content: 36.72

Gene sequence:

>1092_bases
ATGAGTCAGCCTTTTACAATTGGTCCATTCTCTATTGGAGAAAATCATCCTCCTATTTTTTTGGCAGAAATTGGTACTTT
TTTTAATCAGGATCTTGGTGTAGCCGAACAATTACTACACAAAATTATAACCATCAGGGATAAAGTACCGTATCAACCTC
TTATACTAAAAACAGAAATTTTAAATAACCCAAACATTTGCCTACCTGTTGATTATGAAGAAACCTATACCAGTAAATCA
GGTGAGGTCCGCAAGGAAAACTACCGCTCATTAATTGAGAGAAAAGTACTGCCTTTAGAACATTATAGTATGCTATTTTC
ACTATTAAAGAATGCCAATTTACCCTTCATAGTTTCGATTTATGAATTGGACACTATTGATTTTGCGATAAAGCAGGGTG
CCTGCGCACTCAAAACCTCTTCATCGAACATTGTCCATGTTCCTTTAATTCGTCATCTGGCAAAAACAGGATTACCGCTC
ATTATTGACACTGGAAGATCTTCTTTAACTGATATATGCAAAGCAGTTGAAACAGCAAAAAGTGCCGGATGTGAAAAAAT
TATTATTGAACATAGTCCTGATGGACATCCTGCTTTGCCAGAAGCACATAACCTAAGAATGTTACGAACTTTAAACCAAT
GTTTTTCATTACCAGTTGGTTTATCTGACCATTATAATGGAATTGAAATGTTGTATATGTCTATTGCATTGGGAGCTTCA
ATCCTGGAAAAAGGAGTTCATCTCTATCCAGAAGATATTGATCAGGACATATCACATACTATGGGGATTGAGCAATTAGC
CAAGACTCTTGAAACAATTTACAATTGTTGGCAAGCTTTAGGTCAACCGATGCGAGATCTAGAAGCTCCCATAAAAGGAG
TACTTGGTAGCTCTCAAAGAACTTGTTTGGTTGCAAAACAAGAACTTCATCCTGGTACTCTAATTAGCCTTGATAATACA
ACCTTTGCCTTTCCTTGCAAGGGAGTACCGACCCAATACTGGGATCTGGTAAATGGGTGGGAATTACAAAACAAGGTATC
TATAGGTGAACCCATTAAATGGTCGGATATTAAGCAAAAAAATGATTGTTAG

Upstream 100 bases:

>100_bases
GACAATGAAAACCGAGTTTAATGATAAGCAATTAACTAATGGTATGAAATTACTGGTAGATCATTATTTATTAGAAATTC
ACATATAAGCGAGGCAGTCA

Downstream 100 bases:

>100_bases
AAACCCTACTTGGAACTCTCTTACTCCTCCGCTTCCTAAATTTGTTTCTTGTGATACAGTTGAGACAAATTTCCTGAAAG
AAAAATTAGGAGAAGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSQPFTIGPFSIGENHPPIFLAEIGTFFNQDLGVAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKS
GEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPL
IIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQELHPGTLISLDNT
TFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Sequences:

>Translated_363_residues
MSQPFTIGPFSIGENHPPIFLAEIGTFFNQDLGVAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKS
GEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPL
IIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQELHPGTLISLDNT
TFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC
>Mature_362_residues
SQPFTIGPFSIGENHPPIFLAEIGTFFNQDLGVAEQLLHKIITIRDKVPYQPLILKTEILNNPNICLPVDYEETYTSKSG
EVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLI
IDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGASI
LEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQRTCLVAKQELHPGTLISLDNTT
FAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=314, Percent_Identity=24.5222929936306, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357081, Length=280, Percent_Identity=23.5714285714286, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 40520; Mature: 40389

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPFTIGPFSIGENHPPIFLAEIGTFFNQDLGVAEQLLHKIITIRDKVPYQPLILKTEI
CCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHH
LNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSI
CCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
YELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLIIDTGRSSLTDICKAVETAK
EEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
SAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQR
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TCLVAKQELHPGTLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQK
EEEEEHHHCCCCEEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDC
CCC
>Mature Secondary Structure 
SQPFTIGPFSIGENHPPIFLAEIGTFFNQDLGVAEQLLHKIITIRDKVPYQPLILKTEI
CCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHH
LNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSI
CCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
YELDTIDFAIKQGACALKTSSSNIVHVPLIRHLAKTGLPLIIDTGRSSLTDICKAVETAK
EEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHH
SAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSIALGAS
HCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ILEKGVHLYPEDIDQDISHTMGIEQLAKTLETIYNCWQALGQPMRDLEAPIKGVLGSSQR
HHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
TCLVAKQELHPGTLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQK
EEEEEHHHCCCCEEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]