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The map label for this gene is pqqE [H]

Identifier: 54293750

GI number: 54293750

Start: 910565

End: 911593

Strand: Direct

Name: pqqE [H]

Synonym: lpl0804

Alternate gene names: 54293750

Gene position: 910565-911593 (Clockwise)

Preceding gene: 54293749

Following gene: 54293755

Centisome position: 27.22

GC content: 32.17

Gene sequence:

>1029_bases
ATGACACATATAAAAAAAGAAACTAAAATTGTTAAATTGACCAATATTTACTCTATTGAAGATGAACAAGATAGTTATAT
TGGTAAACGAGTCATAGACATGATTCGTGCCACAAAGCAAGTGGAGACCCCACCATTCCCTAGACAAATACAAGTAGAAA
CAACAAACATTTGTAATCACAATTGTGAATTTTGTGCTTATACTGTTATGGAAAGACCGAAGCGTCAAATGGATCCTGAT
TTATTTAAGCGGCTGGTAAAAGAAGCATATGAATGTGGAGCTAGAGAAATTGGTTTATTTTCTGGAGCAGAACCACTCAC
ATGCAAATATTTAAATGAATATATTGATTACTGCAGACGATTAGGATATGAGTATATGTATTTATCTACTAATGGTTCAG
TTCCTGATAAGAATAAATTTAAGCAAATACTTGATGCGGGGCTAAATTCCATAAAATTTTCTGTCAATGGGGGAAATAGA
GCGATATATAAACAAATTCATGGGAATGATCACTTTGAGCGAGTAATTGATAATATAAAATTTGTCAGCCAATATCGTTG
TAACGTTAAACAACAAGTTTATCTGGCTGTATCTTTCGTGGGTATGGATTCATCAAAAGAAACATTCGAAGAATTAAAGC
AGATCTTGGATGGCTATGTAGATGAAATACTTTATTATGATGCGGCTAATCAATCAGGGCAAATGCCACATTTACCGTTG
CCTCCTTATCGAGAATGTCATTTACCTTTCAGTAAATTACATATCAGTAGAGAGGGATACTTAAGAGCTTGTTGTAATGA
TTATGAAAATTTATTGGCAATGGAAGATTTAAATATTACTCCTATGAAAGAAGCATGGAATAGTAAGCTTTTCCAAGAAT
TAAGAAGTAAACATATTAATAATAAATTGGATGGTATATTATGCGGAAATTGTATTCGGGCTTCTAAAATAAAAGCATGT
GCAATTAATCCTGAGCTCATTCATCAAAAGGATAATAAATTAAAACAGATTCCTATAATTGCTGAATAA

Upstream 100 bases:

>100_bases
TATTAGTGGTATTTTGATAAATATTTTTATGAGATTAATAATGCTTGATATATTGCGATTACACTGAATTATTATATAAT
TTTTTTTTTAAAGGATTTAT

Downstream 100 bases:

>100_bases
GTTTTCTGGTTATATAGTTTTTATTATCCAAGATTTTTAAATATCTAACTCAGCTGCCCTGTTAGGTGTAAACGTTCACG
CCCCTTGTAAAGGGGCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTHIKKETKIVKLTNIYSIEDEQDSYIGKRVIDMIRATKQVETPPFPRQIQVETTNICNHNCEFCAYTVMERPKRQMDPD
LFKRLVKEAYECGAREIGLFSGAEPLTCKYLNEYIDYCRRLGYEYMYLSTNGSVPDKNKFKQILDAGLNSIKFSVNGGNR
AIYKQIHGNDHFERVIDNIKFVSQYRCNVKQQVYLAVSFVGMDSSKETFEELKQILDGYVDEILYYDAANQSGQMPHLPL
PPYRECHLPFSKLHISREGYLRACCNDYENLLAMEDLNITPMKEAWNSKLFQELRSKHINNKLDGILCGNCIRASKIKAC
AINPELIHQKDNKLKQIPIIAE

Sequences:

>Translated_342_residues
MTHIKKETKIVKLTNIYSIEDEQDSYIGKRVIDMIRATKQVETPPFPRQIQVETTNICNHNCEFCAYTVMERPKRQMDPD
LFKRLVKEAYECGAREIGLFSGAEPLTCKYLNEYIDYCRRLGYEYMYLSTNGSVPDKNKFKQILDAGLNSIKFSVNGGNR
AIYKQIHGNDHFERVIDNIKFVSQYRCNVKQQVYLAVSFVGMDSSKETFEELKQILDGYVDEILYYDAANQSGQMPHLPL
PPYRECHLPFSKLHISREGYLRACCNDYENLLAMEDLNITPMKEAWNSKLFQELRSKHINNKLDGILCGNCIRASKIKAC
AINPELIHQKDNKLKQIPIIAE
>Mature_341_residues
THIKKETKIVKLTNIYSIEDEQDSYIGKRVIDMIRATKQVETPPFPRQIQVETTNICNHNCEFCAYTVMERPKRQMDPDL
FKRLVKEAYECGAREIGLFSGAEPLTCKYLNEYIDYCRRLGYEYMYLSTNGSVPDKNKFKQILDAGLNSIKFSVNGGNRA
IYKQIHGNDHFERVIDNIKFVSQYRCNVKQQVYLAVSFVGMDSSKETFEELKQILDGYVDEILYYDAANQSGQMPHLPLP
PYRECHLPFSKLHISREGYLRACCNDYENLLAMEDLNITPMKEAWNSKLFQELRSKHINNKLDGILCGNCIRASKIKACA
INPELIHQKDNKLKQIPIIAE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39624; Mature: 39493

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHIKKETKIVKLTNIYSIEDEQDSYIGKRVIDMIRATKQVETPPFPRQIQVETTNICNH
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
NCEFCAYTVMERPKRQMDPDLFKRLVKEAYECGAREIGLFSGAEPLTCKYLNEYIDYCRR
CCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
LGYEYMYLSTNGSVPDKNKFKQILDAGLNSIKFSVNGGNRAIYKQIHGNDHFERVIDNIK
CCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHH
FVSQYRCNVKQQVYLAVSFVGMDSSKETFEELKQILDGYVDEILYYDAANQSGQMPHLPL
HHHHHHCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PPYRECHLPFSKLHISREGYLRACCNDYENLLAMEDLNITPMKEAWNSKLFQELRSKHIN
CCCHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
NKLDGILCGNCIRASKIKACAINPELIHQKDNKLKQIPIIAE
CCCCCEEECCCHHHCCCEEEECCHHHHHCCCCCHHCCCCCCC
>Mature Secondary Structure 
THIKKETKIVKLTNIYSIEDEQDSYIGKRVIDMIRATKQVETPPFPRQIQVETTNICNH
CCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
NCEFCAYTVMERPKRQMDPDLFKRLVKEAYECGAREIGLFSGAEPLTCKYLNEYIDYCRR
CCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
LGYEYMYLSTNGSVPDKNKFKQILDAGLNSIKFSVNGGNRAIYKQIHGNDHFERVIDNIK
CCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHH
FVSQYRCNVKQQVYLAVSFVGMDSSKETFEELKQILDGYVDEILYYDAANQSGQMPHLPL
HHHHHHCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PPYRECHLPFSKLHISREGYLRACCNDYENLLAMEDLNITPMKEAWNSKLFQELRSKHIN
CCCHHHCCCHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
NKLDGILCGNCIRASKIKACAINPELIHQKDNKLKQIPIIAE
CCCCCEEECCCHHHCCCEEEECCHHHHHCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA