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The map label for this gene is phbC [H]

Identifier: 54293582

GI number: 54293582

Start: 684419

End: 686161

Strand: Reverse

Name: phbC [H]

Synonym: lpl0634

Alternate gene names: 54293582

Gene position: 686161-684419 (Counterclockwise)

Preceding gene: 54293591

Following gene: 54293581

Centisome position: 20.51

GC content: 38.38

Gene sequence:

>1743_bases
ATGACTCACGATACTGAACTAAGCGAACTGATGCAGGCTGTAGCTAAAAAAAGCCTGCAGATTATGACCGATTTCAAAGA
AAAACCCATCCCGCTTTCATCGCTGGTCAGTCAATACATCGATCTCACGGAGCATTTCCAAAATTTGATTGCCGTCATTC
TAAAAAATCCTGAAAAAGTATGGCAAATGCAGTTGAATTACCTCGAAGATGCCTTAAGTCTGGCTCAAGCACAATTTAAT
TATTGGCTTGAAGGAAAACCACTGCCTATTAACGATCAGCGTTTTAATGGGGAAGATTGGATAAACAATCCCTTTTTTAA
CTTGCTAAGCCAACATTATCTTTTGGCAAATGAGCATATGAATTCATTGCTGGAAAATATGGAATATGGTGACGAGAATC
TGGCAAAAAGAGTACGTTTTTTCACCCGACAATATCTTGATGCTTTATCCCCAGCTAACTTTATTCACACGAATCCTCAG
CTCATGGCAGAAACATTACAAAGTCATGGTAAAAACCTATTACGTGGATTACACAATTTGCTATCCGATGTTGAAGCAGG
ATCCTCCAGATTAATCATTAAAATGACTGATACGGAAGCATTTAAAATCGGTGAGAATCTGGCTACAACGCCTGGTAAAG
TCATATTTCGCAATTCCATGATGGAGTTAATCCAATATTGCCCCAGAACAACAAAAGCAAAATCCATACCTTTACTTATC
GTTCCTCCCTGGATTAATAAATACTACATTTTAGACTTAAGCCCGCATAATTCATTAATACGCTGGTTGGTCGAACAAGG
GATTACTGTTTTTATTATCTCCTGGGTCAACCCTGACGAAACGTATGCCAATAAAAGCTTCTATGATTATTTAAATGAAG
GCCCCAGAGAAGCCATTTCAGTAATCCAAAAACAATTGCGTGTTAAACAAGTCAATACGCTGGGATTCTGTATAGGCGGG
ACACTTCTGGCTTCTCTTTTAGCCTACAATAAGGCAACTAAGGATCTTTCCATTCGCAGTGCAACCTTTTTAGCGGCAAT
GATTGATTTCAGTGATCCTGGAGACATTGCTGTTTTTATTGATGAGCAGCAGATTAATAAACTTGAAGAAGAAATGAAAT
CCAAAGGTTATCTGGCTGGCAAATTTATGGCGTCCAGCTTTAATTCCTTAAGGGCAAATGACCTAATATGGTCATTTTTC
ATCAAAAATTACCTGCGCGGTAAAAGCCCTGTTCCTTTTGACATACTCTATTGGAATGCTGATTCAACTAATATGCCTGC
AACCATGCATTCTCAATATTTACGTTGGATGTATTTGCATAATAACTTGATAAAACCTGGAAAAATTCGCCTTAATCATA
TCCCTGTTGACGTAACAAATATCGACATACCCACTTTCTTTCTGTCTACTCAAAAAGATCATATCGCCCCCTGGAAAACA
ACATATAAAGGATTTGAATTAATGAAGGGGCCAAAACGTTTTGTTTTAGGTGGATCTGGACATATTGCAGGAATTATTAA
TCCGCCAACCCAGCAAAAATATGGTTATAGAACCAATAACAGCATGGATTTATCTGCTGAGCAATGGTTTGAAAAATCCA
AGGAACACTCCGGTTCATGGTGGCCAGAATGGTTAAATTGGCTTAAATTGCATTCCGGAAGACTCATCAATGCCCCTGAT
ATCAATCACTTGCCATTCGCACCGATAATGGATGCTCCAGGAAGTTATGTACTAAAAAAATAA

Upstream 100 bases:

>100_bases
CTATCTATAATGTGCTCTGGATTTAATATAGAATACTCTTGATAAACACAACCAAACCCATAAGAATAAGCTATTCGATT
ATTTGCTTTCAGGAGCCAGG

Downstream 100 bases:

>100_bases
TATTTTGAACTCAATAACCATACATTAAAACATAAAAGGAGTTGTATTGTGAGAAAAAAAAACAGGATACTTTTGGCAAG
TTTATTCTCGCTAGGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 580; Mature: 579

Protein sequence:

>580_residues
MTHDTELSELMQAVAKKSLQIMTDFKEKPIPLSSLVSQYIDLTEHFQNLIAVILKNPEKVWQMQLNYLEDALSLAQAQFN
YWLEGKPLPINDQRFNGEDWINNPFFNLLSQHYLLANEHMNSLLENMEYGDENLAKRVRFFTRQYLDALSPANFIHTNPQ
LMAETLQSHGKNLLRGLHNLLSDVEAGSSRLIIKMTDTEAFKIGENLATTPGKVIFRNSMMELIQYCPRTTKAKSIPLLI
VPPWINKYYILDLSPHNSLIRWLVEQGITVFIISWVNPDETYANKSFYDYLNEGPREAISVIQKQLRVKQVNTLGFCIGG
TLLASLLAYNKATKDLSIRSATFLAAMIDFSDPGDIAVFIDEQQINKLEEEMKSKGYLAGKFMASSFNSLRANDLIWSFF
IKNYLRGKSPVPFDILYWNADSTNMPATMHSQYLRWMYLHNNLIKPGKIRLNHIPVDVTNIDIPTFFLSTQKDHIAPWKT
TYKGFELMKGPKRFVLGGSGHIAGIINPPTQQKYGYRTNNSMDLSAEQWFEKSKEHSGSWWPEWLNWLKLHSGRLINAPD
INHLPFAPIMDAPGSYVLKK

Sequences:

>Translated_580_residues
MTHDTELSELMQAVAKKSLQIMTDFKEKPIPLSSLVSQYIDLTEHFQNLIAVILKNPEKVWQMQLNYLEDALSLAQAQFN
YWLEGKPLPINDQRFNGEDWINNPFFNLLSQHYLLANEHMNSLLENMEYGDENLAKRVRFFTRQYLDALSPANFIHTNPQ
LMAETLQSHGKNLLRGLHNLLSDVEAGSSRLIIKMTDTEAFKIGENLATTPGKVIFRNSMMELIQYCPRTTKAKSIPLLI
VPPWINKYYILDLSPHNSLIRWLVEQGITVFIISWVNPDETYANKSFYDYLNEGPREAISVIQKQLRVKQVNTLGFCIGG
TLLASLLAYNKATKDLSIRSATFLAAMIDFSDPGDIAVFIDEQQINKLEEEMKSKGYLAGKFMASSFNSLRANDLIWSFF
IKNYLRGKSPVPFDILYWNADSTNMPATMHSQYLRWMYLHNNLIKPGKIRLNHIPVDVTNIDIPTFFLSTQKDHIAPWKT
TYKGFELMKGPKRFVLGGSGHIAGIINPPTQQKYGYRTNNSMDLSAEQWFEKSKEHSGSWWPEWLNWLKLHSGRLINAPD
INHLPFAPIMDAPGSYVLKK
>Mature_579_residues
THDTELSELMQAVAKKSLQIMTDFKEKPIPLSSLVSQYIDLTEHFQNLIAVILKNPEKVWQMQLNYLEDALSLAQAQFNY
WLEGKPLPINDQRFNGEDWINNPFFNLLSQHYLLANEHMNSLLENMEYGDENLAKRVRFFTRQYLDALSPANFIHTNPQL
MAETLQSHGKNLLRGLHNLLSDVEAGSSRLIIKMTDTEAFKIGENLATTPGKVIFRNSMMELIQYCPRTTKAKSIPLLIV
PPWINKYYILDLSPHNSLIRWLVEQGITVFIISWVNPDETYANKSFYDYLNEGPREAISVIQKQLRVKQVNTLGFCIGGT
LLASLLAYNKATKDLSIRSATFLAAMIDFSDPGDIAVFIDEQQINKLEEEMKSKGYLAGKFMASSFNSLRANDLIWSFFI
KNYLRGKSPVPFDILYWNADSTNMPATMHSQYLRWMYLHNNLIKPGKIRLNHIPVDVTNIDIPTFFLSTQKDHIAPWKTT
YKGFELMKGPKRFVLGGSGHIAGIINPPTQQKYGYRTNNSMDLSAEQWFEKSKEHSGSWWPEWLNWLKLHSGRLINAPDI
NHLPFAPIMDAPGSYVLKK

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 66609; Mature: 66478

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDTELSELMQAVAKKSLQIMTDFKEKPIPLSSLVSQYIDLTEHFQNLIAVILKNPEKV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
WQMQLNYLEDALSLAQAQFNYWLEGKPLPINDQRFNGEDWINNPFFNLLSQHYLLANEHM
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NSLLENMEYGDENLAKRVRFFTRQYLDALSPANFIHTNPQLMAETLQSHGKNLLRGLHNL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
LSDVEAGSSRLIIKMTDTEAFKIGENLATTPGKVIFRNSMMELIQYCPRTTKAKSIPLLI
HHHHCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VPPWINKYYILDLSPHNSLIRWLVEQGITVFIISWVNPDETYANKSFYDYLNEGPREAIS
ECCCCCEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCHHHCCCHHHHHHCCCHHHHHH
VIQKQLRVKQVNTLGFCIGGTLLASLLAYNKATKDLSIRSATFLAAMIDFSDPGDIAVFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
DEQQINKLEEEMKSKGYLAGKFMASSFNSLRANDLIWSFFIKNYLRGKSPVPFDILYWNA
CHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DSTNMPATMHSQYLRWMYLHNNLIKPGKIRLNHIPVDVTNIDIPTFFLSTQKDHIAPWKT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCHH
TYKGFELMKGPKRFVLGGSGHIAGIINPPTQQKYGYRTNNSMDLSAEQWFEKSKEHSGSW
HHCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
WPEWLNWLKLHSGRLINAPDINHLPFAPIMDAPGSYVLKK
CHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
THDTELSELMQAVAKKSLQIMTDFKEKPIPLSSLVSQYIDLTEHFQNLIAVILKNPEKV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
WQMQLNYLEDALSLAQAQFNYWLEGKPLPINDQRFNGEDWINNPFFNLLSQHYLLANEHM
HHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NSLLENMEYGDENLAKRVRFFTRQYLDALSPANFIHTNPQLMAETLQSHGKNLLRGLHNL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
LSDVEAGSSRLIIKMTDTEAFKIGENLATTPGKVIFRNSMMELIQYCPRTTKAKSIPLLI
HHHHCCCCCEEEEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEE
VPPWINKYYILDLSPHNSLIRWLVEQGITVFIISWVNPDETYANKSFYDYLNEGPREAIS
ECCCCCEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCHHHCCCHHHHHHCCCHHHHHH
VIQKQLRVKQVNTLGFCIGGTLLASLLAYNKATKDLSIRSATFLAAMIDFSDPGDIAVFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
DEQQINKLEEEMKSKGYLAGKFMASSFNSLRANDLIWSFFIKNYLRGKSPVPFDILYWNA
CHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
DSTNMPATMHSQYLRWMYLHNNLIKPGKIRLNHIPVDVTNIDIPTFFLSTQKDHIAPWKT
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCHH
TYKGFELMKGPKRFVLGGSGHIAGIINPPTQQKYGYRTNNSMDLSAEQWFEKSKEHSGSW
HHCCHHHHCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
WPEWLNWLKLHSGRLINAPDINHLPFAPIMDAPGSYVLKK
CHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748438 [H]