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The map label for this gene is yuxH [H]

Identifier: 54293522

GI number: 54293522

Start: 619175

End: 620314

Strand: Reverse

Name: yuxH [H]

Synonym: lpl0573

Alternate gene names: 54293522

Gene position: 620314-619175 (Counterclockwise)

Preceding gene: 54293533

Following gene: 54293521

Centisome position: 18.54

GC content: 35.61

Gene sequence:

>1140_bases
ATGATCGCCAAAAGACCAATATATAATCAACAATTAAAATGTGTCGCCTTTGAAATATTATCCTGTCGCAATGTAATACT
TAATGAAGAATTAACAAGGCAATTTTATGAGCTCATTTACCACACAGACACCCAATTACCTTTATTTGTTCCTTTTTCCC
TAAAAAAATTGCTTGAGCAATTTGAGATGCCAATCAACAACCCCATTATTTTAAAATTATCCGCAGATGAAATCGAATCG
GTTTATTCACTAACTGAGCTACAAGACTCTCTATTTTCTATTGCCTTACTGATTAATACCCCTCAACAATTGGCTTGGCT
AAATTTTGCCGAATACATAGGGTTGACTGAGCAATTAATGAGTAAATCGGATGTAACCAAGGTAGTACAATACAGTAAGG
CAAAAAACCGTAAAATCATCGCTTATGATCTAAATCAACACGTTAATTTTGAAAAATGTAAGGCTATGACCATGGATTAT
TACTGTGGCGATTTCCTGCTTAACTACATTGCAGAGGAGCACACAGAAATAGCAGCAAACAAATTAAATGTACTTCAACT
CATCCAGGAATTACAAAAAGAAGATTGCGATTTAAAAACGATCACTCATATCATCCAAGAAGATCCATTACTAAGCTATC
AACTTCTAAAACTGGTCAATTCAGTTGGGTTTTCTAGCGGACCAAGCATAGAATCCATCGATCAAGCCGTTGCCAGGCTT
GGCACCATTAACCTGAAAAAATGGGTTATGTTGTTTTCCATGAAAAATATCTCTGATAAACCTGTAGAAATATTGGAGTC
AGGTCTAATCAGAGCTCATATGGCGGAAGAGCTCGCTAAAAAAAGTTCGAATATTTTCAGCCAAAGTGCCTATACTGCAG
GATTATTATCCATATTAGACTGCTTATTAAACAAACCCATGCCAGCATTGGTAGAACAAATCACCCTGGCTGAGGAGATA
AAAAATGCTTTGACAAATAAATCAGGACCATTAGGAAATCTATTGTCTTTGGTAATTGCTTATGAAGAAGGGCATTGGGA
AGAAGTAACTCAACTTAACATCAATGGAATTGATTTAAGTCAATTATATATTGACAGTTTAGCCTTGGTAAGCCAGGGTA
CAAAAATCATGAGTAACTGA

Upstream 100 bases:

>100_bases
TTATCACGCAAAGTTCAGTTTATAAGGAAAATGAATAGTCCATTGGCCAATTACAAAAAGCCGTACTATGATTACATAAT
GTGAGCAAAAGGAGATCTTT

Downstream 100 bases:

>100_bases
TTGCGCAACAATTTAAGCAATATTCTTTTTATTTTTCTATGCCTGAATCAGGCTTCTATTTGAGCAACAAAAAATTTAGA
ATGTGTTTTCCTAAATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFEMPINNPIILKLSADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMSKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCKAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLKTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN

Sequences:

>Translated_379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFEMPINNPIILKLSADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMSKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCKAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLKTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN
>Mature_379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFEMPINNPIILKLSADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMSKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCKAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLKTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 42890; Mature: 42890

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH
FEMPINNPIILKLSADEIESVYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLM
HCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
SKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCKAMTMDYYCGDFLLNYIAEEHTEIAAN
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNVLQLIQELQKEDCDLKTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILD
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLLNKPMPALVEQITLAEEIKNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLS
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCCHH
QLYIDSLALVSQGTKIMSN
HHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH
FEMPINNPIILKLSADEIESVYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLM
HCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
SKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCKAMTMDYYCGDFLLNYIAEEHTEIAAN
HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNVLQLIQELQKEDCDLKTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILD
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLLNKPMPALVEQITLAEEIKNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLS
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCCHH
QLYIDSLALVSQGTKIMSN
HHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]