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The map label for this gene is uspE [H]

Identifier: 54293516

GI number: 54293516

Start: 612655

End: 613590

Strand: Reverse

Name: uspE [H]

Synonym: lpl0566

Alternate gene names: 54293516

Gene position: 613590-612655 (Counterclockwise)

Preceding gene: 54293521

Following gene: 54293515

Centisome position: 18.34

GC content: 38.89

Gene sequence:

>936_bases
ATGAAGCATTTTCATAATATTCTGTTTGTAAGTAACGGAATTGGTGAAGAAACGGAGGCTTTAGGACATGCGATAAGATT
GGCAGCGGATAATAACGCAAGTCTTGATATTCTGATAACATGTCCTCCCTTTCCGCATAGTCTTGATGACTATAAAAGCT
CGTATGAGACTTTTCTTATAGAAAAAATGAACCACACCATTCAATCCGCGAAAACCACCTTATCTCTTAATAAGAAAGAA
CCATCAATAAAGATAGAAATTGAATGTGGAAATACGCCAGATATTCGTATTACTCAGCGTGTACTTCGCCACTCCTACGA
TCTTGTAGTGAAAGCGGCAGAAAAAAATGAGAATAAAAAAGGGTTTAGGGCATTAGATATGGCCTTGTTACGCCAATGCC
CTTGCGCTTTGTTTCTTCACCGTCCGATAACTCCTGATGAAACGATTCATATCGCTGTTGCTATCGACCCCAAAGATGAA
GAAGTTTCAGGCCATGATCTTGCCATTAACCTTTTAAGGTTGTCTTATGCTCTTTCAATACATTATAAGGCTAAATTAAG
TGTTATTACTTGCTGGGATTTCGTTCTGGAAGATTATTTGCGTCGTAGTGTTCTTATTGATATTCCTCCGCCAGAGCTGG
ATGAAATGGTTATGAAAGAGAGTCGCTCACATTATAGTGCATTGTGTGCACTGATTCATGAATCGGGTATAAAAGCTCAA
CCAACCATCTATCACCTGAAAGGCCGCCCTGCGGAACATATTCCTTCGTGCATTAATGAGAATAAAATTGACATTTTAGT
AATGGGGACTGTCGCGCGAACAGGAATATCTGGCTTTTTTATTGGTAATACAGCTGAAAATATTCTGCAAAAAATCAATT
GTTCACTTTGGGCACTTAAACCACAGGGATTTGTATCGCCTGTAAAAGCCTATTAA

Upstream 100 bases:

>100_bases
ATAGTCTAAAATATAATTATTAAAAAGAGTTTACTCTAAAAATCAATTAAATAAAGTAATTTGGGGCTAAATTTGGCTTA
TGAATTCATGGAGGAAAAGG

Downstream 100 bases:

>100_bases
AATCAAAAAATAGCAATCTTCTTTTTCATAATTTGGGATAATATGAAGAAAAATAATAAACTTCATTCATGGCATGATCG
TATGGATACTGATATTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKHFHNILFVSNGIGEETEALGHAIRLAADNNASLDILITCPPFPHSLDDYKSSYETFLIEKMNHTIQSAKTTLSLNKKE
PSIKIEIECGNTPDIRITQRVLRHSYDLVVKAAEKNENKKGFRALDMALLRQCPCALFLHRPITPDETIHIAVAIDPKDE
EVSGHDLAINLLRLSYALSIHYKAKLSVITCWDFVLEDYLRRSVLIDIPPPELDEMVMKESRSHYSALCALIHESGIKAQ
PTIYHLKGRPAEHIPSCINENKIDILVMGTVARTGISGFFIGNTAENILQKINCSLWALKPQGFVSPVKAY

Sequences:

>Translated_311_residues
MKHFHNILFVSNGIGEETEALGHAIRLAADNNASLDILITCPPFPHSLDDYKSSYETFLIEKMNHTIQSAKTTLSLNKKE
PSIKIEIECGNTPDIRITQRVLRHSYDLVVKAAEKNENKKGFRALDMALLRQCPCALFLHRPITPDETIHIAVAIDPKDE
EVSGHDLAINLLRLSYALSIHYKAKLSVITCWDFVLEDYLRRSVLIDIPPPELDEMVMKESRSHYSALCALIHESGIKAQ
PTIYHLKGRPAEHIPSCINENKIDILVMGTVARTGISGFFIGNTAENILQKINCSLWALKPQGFVSPVKAY
>Mature_311_residues
MKHFHNILFVSNGIGEETEALGHAIRLAADNNASLDILITCPPFPHSLDDYKSSYETFLIEKMNHTIQSAKTTLSLNKKE
PSIKIEIECGNTPDIRITQRVLRHSYDLVVKAAEKNENKKGFRALDMALLRQCPCALFLHRPITPDETIHIAVAIDPKDE
EVSGHDLAINLLRLSYALSIHYKAKLSVITCWDFVLEDYLRRSVLIDIPPPELDEMVMKESRSHYSALCALIHESGIKAQ
PTIYHLKGRPAEHIPSCINENKIDILVMGTVARTGISGFFIGNTAENILQKINCSLWALKPQGFVSPVKAY

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=320, Percent_Identity=26.5625, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 34893; Mature: 34893

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHFHNILFVSNGIGEETEALGHAIRLAADNNASLDILITCPPFPHSLDDYKSSYETFLI
CCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
EKMNHTIQSAKTTLSLNKKEPSIKIEIECGNTPDIRITQRVLRHSYDLVVKAAEKNENKK
HHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHEEEEECCCCCCCC
GFRALDMALLRQCPCALFLHRPITPDETIHIAVAIDPKDEEVSGHDLAINLLRLSYALSI
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHEEEEEEEEEE
HYKAKLSVITCWDFVLEDYLRRSVLIDIPPPELDEMVMKESRSHYSALCALIHESGIKAQ
EEEEEEEEEHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PTIYHLKGRPAEHIPSCINENKIDILVMGTVARTGISGFFIGNTAENILQKINCSLWALK
CEEEEECCCCHHHHHHHHCCCCEEEEEEECHHHCCCCEEEECCCHHHHHHHHCCEEEEEC
PQGFVSPVKAY
CCCCCCCCCCC
>Mature Secondary Structure
MKHFHNILFVSNGIGEETEALGHAIRLAADNNASLDILITCPPFPHSLDDYKSSYETFLI
CCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
EKMNHTIQSAKTTLSLNKKEPSIKIEIECGNTPDIRITQRVLRHSYDLVVKAAEKNENKK
HHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHEEEEECCCCCCCC
GFRALDMALLRQCPCALFLHRPITPDETIHIAVAIDPKDEEVSGHDLAINLLRLSYALSI
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHEEEEEEEEEE
HYKAKLSVITCWDFVLEDYLRRSVLIDIPPPELDEMVMKESRSHYSALCALIHESGIKAQ
EEEEEEEEEHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PTIYHLKGRPAEHIPSCINENKIDILVMGTVARTGISGFFIGNTAENILQKINCSLWALK
CEEEEECCCCHHHHHHHHCCCCEEEEEEECHHHCCCCEEEECCCHHHHHHHHCCEEEEEC
PQGFVSPVKAY
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]