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The map label for this gene is yibP [H]

Identifier: 54293489

GI number: 54293489

Start: 585742

End: 586884

Strand: Reverse

Name: yibP [H]

Synonym: lpl0538

Alternate gene names: 54293489

Gene position: 586884-585742 (Counterclockwise)

Preceding gene: 54293490

Following gene: 54293488

Centisome position: 17.54

GC content: 38.32

Gene sequence:

>1143_bases
ATGCACATGCCTAGCCTATCCAACTCTTTATCCGGTGCTTCTCTTGGTTTGGCACTTATGGTCATTCTATTTTTTTGTAA
TGGCCTTGAGGCAAAAGCTGCTCCAAATTCTATAACTCAAGCACAAACCAAACTAAAACAGTTAGATGCCAAGATTAACA
AACTAAAGCAAGTTTTAGCCAATGCACAGGATAAACGGACTGTGCTAAACCAAGAGCTGGGCAGCACTGAAAAACAAATT
GGAGAAGGAATACGCAAGCTAAGAATCATACAAGCAAATATGTCCGCAAAAGAAAAAAGTATTGCCGAACTGCAAGGGAA
AATAAATCACTTAAATAAACGATTGCAAGCTCAGCAGGAAATGCTGGCAAATCATGTCAGGGCACGTTATCAGATGGGGG
AGTATCAACCTTTGAAATGGTTGATTAACCAAGATGAGCCTTTTAAGATCAACCGAATTTTAACTTATTATCAGTATATA
ATAAGATCACGTCAGCAGTTGATTGATGAAATTGCTCGAACCCGACAAAATCTTAACGACAGTAAAACCAAGCTTGGAAA
TGAACTTGCAGAAAACAAGCAGCTACAATTTAAGTTGTCACAAAATCAAAAACAGCTAGAGCAAAATAAAAGATATCATA
GCACACTGATTCAATCTATTGATAATGACATTCAAAATAATCAACAATCATTAAAAGATTTTCAAAAAGATAGAGACAAC
TTATCTCATCTCATGAAGTCATTATCTCAACAAAGTGTAATTCAAAGCGGCAAACCGTTCACGGGAATGCGCAAAAAATT
GCCGTTACCTGTCCAACCCCCCCATAGATCTTTACGCAGGATGAATCAAGGAGTGACATTTTTTGCCGATGAAGGCTCCA
TAGTTACTGCCGTTTACCCAGGGAAAGTTGTGTTTAGTGATTGGCTAAAAGGTTATGGTTTGCTTCTGATTATTGACCAT
GGCCAAGGGTTTATGACTTTATACGCACACAATCAATCTCTCTTCAAACGCAAAGGACAAATCGTCCATCAAAACGAGCA
AATCGCAAGTGTAGGCCATACCGGTGGAATTAAGCAAAACGGTCTATACTTTGAAATAAGACAAAGAGGAAAAGCGGTCA
ATCCGTTAGACTGGTTGTCTTAA

Upstream 100 bases:

>100_bases
TCCGAAGGAAGTTTAATCGATATAGCACCATCTTTGCTTGCATTACTAGGGATAACCCCGCCTCCGGAAATGACCGGTCG
TATTCTTCTGGAAAAAAACC

Downstream 100 bases:

>100_bases
AGCTTAGCCGCTGGCATTTAAATTGCATAAAAAAATACGCAGGTGGCTAATTTCATGGCCTTGCATCTGAGGAGATCGCT
ATGGTTATTAAGAAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MHMPSLSNSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQPPHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVHQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Sequences:

>Translated_380_residues
MHMPSLSNSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQPPHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVHQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS
>Mature_380_residues
MHMPSLSNSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLANAQDKRTVLNQELGSTEKQI
GEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQEMLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYI
IRSRQQLIDEIARTRQNLNDSKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQPPHRSLRRMNQGVTFFADEGSIVTAVYPGKVVFSDWLKGYGLLLIIDH
GQGFMTLYAHNQSLFKRKGQIVHQNEQIASVGHTGGIKQNGLYFEIRQRGKAVNPLDWLS

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=382, Percent_Identity=27.7486910994764, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082174, Length=107, Percent_Identity=35.5140186915888, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43370; Mature: 43370

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMPSLSNSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NAQDKRTVLNQELGSTEKQIGEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYIIRSRQQLIDEIARTRQNLND
HHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQPPHRSLRRMNQGVTFFADEGSIVTAVYP
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECC
GKVVFSDWLKGYGLLLIIDHGQGFMTLYAHNQSLFKRKGQIVHQNEQIASVGHTGGIKQN
CHHHHHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCEECCHHHHHCCCCCCCCCC
GLYFEIRQRGKAVNPLDWLS
CCEEEEHHCCCCCCCHHCCC
>Mature Secondary Structure
MHMPSLSNSLSGASLGLALMVILFFCNGLEAKAAPNSITQAQTKLKQLDAKINKLKQVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NAQDKRTVLNQELGSTEKQIGEGIRKLRIIQANMSAKEKSIAELQGKINHLNKRLQAQQE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLANHVRARYQMGEYQPLKWLINQDEPFKINRILTYYQYIIRSRQQLIDEIARTRQNLND
HHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SKTKLGNELAENKQLQFKLSQNQKQLEQNKRYHSTLIQSIDNDIQNNQQSLKDFQKDRDN
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LSHLMKSLSQQSVIQSGKPFTGMRKKLPLPVQPPHRSLRRMNQGVTFFADEGSIVTAVYP
HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEECC
GKVVFSDWLKGYGLLLIIDHGQGFMTLYAHNQSLFKRKGQIVHQNEQIASVGHTGGIKQN
CHHHHHHHHCCCCEEEEEECCCCEEEEEECCHHHHHHCCCCEECCHHHHHCCCCCCCCCC
GLYFEIRQRGKAVNPLDWLS
CCEEEEHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]