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The map label for this gene is 54293295

Identifier: 54293295

GI number: 54293295

Start: 394763

End: 395968

Strand: Reverse

Name: 54293295

Synonym: lpl0343

Alternate gene names: NA

Gene position: 395968-394763 (Counterclockwise)

Preceding gene: 54293296

Following gene: 54293294

Centisome position: 11.84

GC content: 41.21

Gene sequence:

>1206_bases
ATGAAAAGGATTTTTATTGTTGTATTTTTGCTTTGTTTAGAAACCGCTTGCAATACAGCAAAAAATAATCCTCTCCCAGC
GCAATTGACAGATAAGGCCGTAGTGCCTGGATTTAAAGCGGTACGCACTGAATTCACCAGCAGTGATGACCCAATAATTA
AAAAACAATCTCTTGAACGGGTAAAACAACTGGCTAAAGCATACCCGGATACCATGTTCCATCGCAAAGGCTCTTTCAGC
TTACTGATTATTTCAGGCGGTGGTGATTATGGTGCTTTTGGTGCTGGATTATTGAATGGGTGGACAAAATCCGGTTCTCG
GCCAACATTTACAACCGTGACAGGTATAAGTACCGGCGCATTGATAGCACCATTAGCTTTTGCTGGCCCCAAATATGATG
CTACATTAAAAAAAGTGTATACAACCATTACCACGAAGGATGTACTGAGTAATAAGCCTGTATTATGGACTCTGTTAACA
GGAGGTAGCGCCCTTAAAGGAACCAAACCATTACAAGACCTGATTGCTCGTCATGTCGATGAAAAATTGCTTGATGACAT
TGCCAAAGGCTATTATCAAGGGCGACGGCTTTATGTAGGGACATCCAATCTTTACTCTCGCAAGCTGGTGGTATGGGATA
TGACCCGCATTGCGGCAAGCAAAAACCCCGAGAGAGTTCAGTTATTCCGAAAAATTCTACTTGCTTCTGCCAGCATTCCC
GTGGTCATGCCGCCTGTTTATTTTGATGTCATGGCCAACGGGAAACCCTACACAGAAATGCACGTTGATGGCTCAACAAC
GTTTGCGGTCTTTTTAAGTCGCCTTGGTTCTGATATCAAAACCGCGAAAAAACATTTCAAATTAAAACAAAAACCAAACG
TTAAAATTTATGTAATACGCAATAACCAGAATCAATTCCATTACAAAGTAATCAAACCCAAGTTATTGGTAATTGGTAAG
CGAGCGATAGAAAGTGTCACGGCATCCCAGGGGGCTGCCGATGTTATTTTTATTTATCTTTGTGCGCTTATAGAGGGAGT
TGATTTTAATTTAGCCAATGTTCCAAATGAGTTTGATTCGAACTCGGAGGAATTGTTTGATACGCAAAGAATGAATCAGT
TATATCAAATTGGTTATTCCAAAGCGGTAAAAGGTTACCCCTGGCAAAAAATCCCTCCAGATGTAAGGGCTTTGCATGGT
GACTAA

Upstream 100 bases:

>100_bases
GTCTGTTTCTTTCTGGTTCGTTAATTTGAAAGCAAGCGCCTATCGCTTTTAATCCATTTTTTGAATAAAATTCAGGGAAT
CATTAAGTTAAAGGAAAATT

Downstream 100 bases:

>100_bases
ATTGCCTGTGAACATAAAATGAAAATACCTGGAGTTCCTCATGGATACTACTCTGGATAACCCAGATTATTATATTAATA
GAGAATTTTCTGCTGTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKRIFIVVFLLCLETACNTAKNNPLPAQLTDKAVVPGFKAVRTEFTSSDDPIIKKQSLERVKQLAKAYPDTMFHRKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D

Sequences:

>Translated_401_residues
MKRIFIVVFLLCLETACNTAKNNPLPAQLTDKAVVPGFKAVRTEFTSSDDPIIKKQSLERVKQLAKAYPDTMFHRKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D
>Mature_401_residues
MKRIFIVVFLLCLETACNTAKNNPLPAQLTDKAVVPGFKAVRTEFTSSDDPIIKKQSLERVKQLAKAYPDTMFHRKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44450; Mature: 44450

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFIVVFLLCLETACNTAKNNPLPAQLTDKAVVPGFKAVRTEFTSSDDPIIKKQSLER
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
VKQLAKAYPDTMFHRKGSFSLLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGA
HHHHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCH
LIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLTGGSALKGTKPLQDLIARHVD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
EKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCC
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIR
EEECCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEE
NNQNQFHYKVIKPKLLVIGKRAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDS
CCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MKRIFIVVFLLCLETACNTAKNNPLPAQLTDKAVVPGFKAVRTEFTSSDDPIIKKQSLER
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHH
VKQLAKAYPDTMFHRKGSFSLLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGA
HHHHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCH
LIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLTGGSALKGTKPLQDLIARHVD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
EKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCC
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIR
EEECCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEE
NNQNQFHYKVIKPKLLVIGKRAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDS
CCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA