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The map label for this gene is 54293266

Identifier: 54293266

GI number: 54293266

Start: 358803

End: 359405

Strand: Reverse

Name: 54293266

Synonym: lpl0314

Alternate gene names: NA

Gene position: 359405-358803 (Counterclockwise)

Preceding gene: 54293269

Following gene: 54293256

Centisome position: 10.74

GC content: 42.29

Gene sequence:

>603_bases
ATGGGAATTGAAGTCTGGGTGATGCGTAAATCAACTCCTTCTTGTGAAAAGCATTTAGCAGCTTTAGCGGATGAGGTGGC
ATCCTGTGTACGTTGTTCTCTGCATAAAACACGTACCCAAACTGTTTTTTCTCGTGGAAACCCCAAAGCAAAACTGATGA
TTATCGGTGAAGCGCCTGGTTTTTATGAGGACCAGAAAGGGCAACCTTTTGTGGGGAAGGCTGGCTTTTTATTAAACAAG
ATGATACGTAGTATTGAAATGACAGAGAATGACGTCTACATTGCCAATGTCTTGAAATGCCGGCCCCCCAATAATCGTGA
TCCAGCGCTTGAGGAAATTTCTCAATGCAGTTCATTCCTGACCCGCCAAATTAAACTCATTAAACCGCACTTAATCCTTG
CTTTAGGACGTTTCGCCGGACAATTCTTGCTTGATAAACCACTTCCTCTGAAGCAGCTGCGTAATCATATTCACTACTAT
GACAATACCCCTTTTATCGTAAGCTATCATCCTGCCTATCTTTTGCGCAACCCCTCGGATAAAAAGAAAGCTTATATTGA
TTGGTTAGCTGTGAAAAATTTTCTGGTGGATTACGGCCAATAA

Upstream 100 bases:

>100_bases
GTCCTGCGTTTAAAAATTTAAGTCTAATCTATAATCCGGATTTTATTAATATCATGAGTTTTTTATGTCAGATGTATTGA
ACAATTACTATCTACAGACT

Downstream 100 bases:

>100_bases
ACTAGGGCGTGTTGGCAATTGACATAAGAGAACCCGATAGAAAATGGCTGATAAATCCATCTTCTACCGGAAAAGACGAT
CCAGATTTTACATTGTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MGIEVWVMRKSTPSCEKHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGFLLNK
MIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALGRFAGQFLLDKPLPLKQLRNHIHYY
DNTPFIVSYHPAYLLRNPSDKKKAYIDWLAVKNFLVDYGQ

Sequences:

>Translated_200_residues
MGIEVWVMRKSTPSCEKHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGFLLNK
MIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALGRFAGQFLLDKPLPLKQLRNHIHYY
DNTPFIVSYHPAYLLRNPSDKKKAYIDWLAVKNFLVDYGQ
>Mature_199_residues
GIEVWVMRKSTPSCEKHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPGFYEDQKGQPFVGKAGFLLNKM
IRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFLTRQIKLIKPHLILALGRFAGQFLLDKPLPLKQLRNHIHYYD
NTPFIVSYHPAYLLRNPSDKKKAYIDWLAVKNFLVDYGQ

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22821; Mature: 22690

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIEVWVMRKSTPSCEKHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPG
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
FYEDQKGQPFVGKAGFLLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TRQIKLIKPHLILALGRFAGQFLLDKPLPLKQLRNHIHYYDNTPFIVSYHPAYLLRNPSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
KKKAYIDWLAVKNFLVDYGQ
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIEVWVMRKSTPSCEKHLAALADEVASCVRCSLHKTRTQTVFSRGNPKAKLMIIGEAPG
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
FYEDQKGQPFVGKAGFLLNKMIRSIEMTENDVYIANVLKCRPPNNRDPALEEISQCSSFL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TRQIKLIKPHLILALGRFAGQFLLDKPLPLKQLRNHIHYYDNTPFIVSYHPAYLLRNPSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCEEEEECCCC
KKKAYIDWLAVKNFLVDYGQ
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA