Click here to switch to the map view.

The map label for this gene is 54293226

Identifier: 54293226

GI number: 54293226

Start: 304459

End: 304812

Strand: Reverse

Name: 54293226

Synonym: lpl0274

Alternate gene names: NA

Gene position: 304812-304459 (Counterclockwise)

Preceding gene: 54293227

Following gene: 54293225

Centisome position: 9.11

GC content: 37.01

Gene sequence:

>354_bases
ATGAATATAATCAAAGTATCAGAAAAAAAAGAGATGAACATCTCTTTGCATCCGATGAAAAAGATCGAAGTGATCGTATC
TGGTGACAATGAAAATATGGTCGCTACTATGATGGAGAAGGCAAATATTTCTGGTTTTACCTTATTGCGAAACATCTCTG
GAAAAGGACATCATGGGTTTCATGAAGGTAAAATTTTGTTTAACGACAAAGCCTCTTTCGTCATGTTTATTGCAGTGGCA
CCTGAGGAAGCTATTGCTAATATTGCGCTTGGCATGAAAACTCTATTCCAAAAGAATTCAGGAGTCCTGTTTGTGTCGGA
TGTTTCTGTTGCTAGAGTCGATTATTTCTCTTAG

Upstream 100 bases:

>100_bases
GAATGGGTTCATTTGGTAGCGATTGATCCGCGGAATCACTTGTTTTACAAGTTAGAGAAAACCAATACCTGGTCTGTAAT
TCAGTGAAAGGAGTTTCCTG

Downstream 100 bases:

>100_bases
TATTTAACTTTGGAGGTGACCCCTATGCACTATCAAAATCAGCGTGTTTTACTGGCCTCAAAACATCAAAAGGAAAAAGC
GATTCAGCCACCTTTTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Nitrogen Regulatory Protein PII

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNIIKVSEKKEMNISLHPMKKIEVIVSGDNENMVATMMEKANISGFTLLRNISGKGHHGFHEGKILFNDKASFVMFIAVA
PEEAIANIALGMKTLFQKNSGVLFVSDVSVARVDYFS

Sequences:

>Translated_117_residues
MNIIKVSEKKEMNISLHPMKKIEVIVSGDNENMVATMMEKANISGFTLLRNISGKGHHGFHEGKILFNDKASFVMFIAVA
PEEAIANIALGMKTLFQKNSGVLFVSDVSVARVDYFS
>Mature_117_residues
MNIIKVSEKKEMNISLHPMKKIEVIVSGDNENMVATMMEKANISGFTLLRNISGKGHHGFHEGKILFNDKASFVMFIAVA
PEEAIANIALGMKTLFQKNSGVLFVSDVSVARVDYFS

Specific function: Unknown

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12919; Mature: 12919

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKVSEKKEMNISLHPMKKIEVIVSGDNENMVATMMEKANISGFTLLRNISGKGHHGF
CCEEECCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCE
HEGKILFNDKASFVMFIAVAPEEAIANIALGMKTLFQKNSGVLFVSDVSVARVDYFS
ECCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MNIIKVSEKKEMNISLHPMKKIEVIVSGDNENMVATMMEKANISGFTLLRNISGKGHHGF
CCEEECCCCCCCCEEECCCEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCE
HEGKILFNDKASFVMFIAVAPEEAIANIALGMKTLFQKNSGVLFVSDVSVARVDYFS
ECCEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA