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The map label for this gene is pqiB [C]

Identifier: 54293186

GI number: 54293186

Start: 258130

End: 258816

Strand: Reverse

Name: pqiB [C]

Synonym: lpl0232

Alternate gene names: 54293186

Gene position: 258816-258130 (Counterclockwise)

Preceding gene: 54293187

Following gene: 54293185

Centisome position: 7.74

GC content: 37.55

Gene sequence:

>687_bases
ATGATTCTAGGCGGTACTTTTTTTTATATAGAATACAAACGCGCACAAAAACAAACGTTTGTCATGTTTTTCAAAGGCTC
TTTAAAAGGGCTAGTCACTACTGCCCCAGTAACCTATCGAGGCGTGAAGATCGGTGAAATCAAAGTCATAGAAATCACTG
AAAATAAAGAGCACAGTAAAGTACTTATTCCTGTTTACGTACAATTTTTTGTCGAGAGAACCTATGGTTTTAGCCAAGAC
CCTATTCACCTGCTTATTGATAATGGGTATGTAGCAAATATTACCAAACCAAACCTGTTAACAGGCGTTGCTGAAATTGA
GTTGATTAAGCCAACCCCAGCGGTAAAATATAAACAAACATACTACCATTCTTATCCTGTTTTCCCGACTCACAATTCAG
CTGAAAAATATACATCTATGGAAGAAGCGTTTGAGGCCGCGAAAAAGGCTTTTGAAGACGTCAGTGAATTAGTTCGTTCC
AAAGAAATTCAAGATACTTTAGAGGCGATACAAAAAGTTTCTGAAAATTTAGGGCAACTAGCCTCTAGCTTAAACCAAGA
TGTGCCCAGTGTTGTTGCGTATTTAAATCAAAGCTTAAAACAAATTACCAGTGCAGCTTACTCCACTCAAAACTTGACGG
ATTATTTGTCTCGATATCCTGAATCTTTACTTCGAGGCAAAAGATGA

Upstream 100 bases:

>100_bases
ATTGCCAGTATGTATATTACTCTTACGTTTTAGGGATGACGTGCATAACGAACGATTCTATACATTAGTGGGTATTTTTA
TAGTAGGCGCCCTATGTTTA

Downstream 100 bases:

>100_bases
AAAACAATAGACATTTTTTAAAATTCTATTGCATCAGAGATCTGAGTTGGCTAAGTAGTGTTCGAGCCTCTTTTATATAT
TCCTCCTTTGAGAGCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Paraquat-Inducible B Protein; Mammalian Cell Entry Related Domain Protein

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEHSKVLIPVYVQFFVERTYGFSQD
PIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRS
KEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAYSTQNLTDYLSRYPESLLRGKR

Sequences:

>Translated_228_residues
MILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEHSKVLIPVYVQFFVERTYGFSQD
PIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRS
KEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAYSTQNLTDYLSRYPESLLRGKR
>Mature_228_residues
MILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEHSKVLIPVYVQFFVERTYGFSQD
PIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRS
KEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQSLKQITSAAYSTQNLTDYLSRYPESLLRGKR

Specific function: Unknown

COG id: COG3008

COG function: function code R; Paraquat-inducible protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25843; Mature: 25843

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEHSK
CEECEEEEEEEEECCCCEEEEEEEECCCCCEEEECCEEECCEEECCEEEEEEECCCCCCE
VLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQT
EEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHEEEEECCCCCCEEHHH
YYHSYPVFPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQL
HEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSLNQDVPSVVAYLNQSLKQITSAAYSTQNLTDYLSRYPESLLRGKR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MILGGTFFYIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEHSK
CEECEEEEEEEEECCCCEEEEEEEECCCCCEEEECCEEECCEEECCEEEEEEECCCCCCE
VLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQT
EEHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCHHHHHHHEEEEECCCCCCEEHHH
YYHSYPVFPTHNSAEKYTSMEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQL
HEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSLNQDVPSVVAYLNQSLKQITSAAYSTQNLTDYLSRYPESLLRGKR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA