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The map label for this gene is 54293133

Identifier: 54293133

GI number: 54293133

Start: 202239

End: 202805

Strand: Direct

Name: 54293133

Synonym: lpl0172

Alternate gene names: NA

Gene position: 202239-202805 (Clockwise)

Preceding gene: 54293132

Following gene: 54293134

Centisome position: 6.04

GC content: 31.22

Gene sequence:

>567_bases
ATGGATCTTTCCATCATTATTAATACCATTGCTACCTTAGCAACAGTATTCATATCTTTTGTATTAAGTAAGTACTTATA
TAATAGAGCAAAATTAGTAACTTATTGCTTACACGCATCTGCTCATAAAATTAAAGATCCTGCCGGTATAATAAATACAC
ACGCTATAGTTATAAGAAATGCCGGTAGGATTGCAGCAAAAAATGTTCGTGTGGGGCATTATGTATTCCCTGAGTTAAGC
TGCACAGTAACCCCACCAATTGAATATGAGAAGAAAGAAATTGAAGGAGGAACTGAATTAATATTTCCTACTTTAGTTCC
TCAAGAACAAATAGTTATTTCATATTTATATTTTCCACCTATAACAATTCGTGATGTTAATACTTATGTCAAATCAGATG
AAGGGTTTGCAAAAATATTAAACATTATTCCTTCACCCAAGTTACCGGGATGGTTGGAAAAAATACTTTATATTCTTTTG
TTTATTGGTGGCGTGGTTGTCATGCGAATAATAATCCAATTAATAATTTTTATATTTCAGAGTGTTAGTCATTTTTGCGT
TTTTTAA

Upstream 100 bases:

>100_bases
CGTTTCCCAATTAATGCGTCAAGATGAATGTTATATAAAATTATTTGAAATTAGCGGCGAGAGCCTATTTATAAAATAAA
TCTTTGGAGTATGTCATTAT

Downstream 100 bases:

>100_bases
TTCCTAATATTATCAAATATGTACAATACACTATAAGAGAGATTTGAATAAAATTATTGAAATTATTTGATCTTAATTAT
ATATTCCCAAAGTTTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MDLSIIINTIATLATVFISFVLSKYLYNRAKLVTYCLHASAHKIKDPAGIINTHAIVIRNAGRIAAKNVRVGHYVFPELS
CTVTPPIEYEKKEIEGGTELIFPTLVPQEQIVISYLYFPPITIRDVNTYVKSDEGFAKILNIIPSPKLPGWLEKILYILL
FIGGVVVMRIIIQLIIFIFQSVSHFCVF

Sequences:

>Translated_188_residues
MDLSIIINTIATLATVFISFVLSKYLYNRAKLVTYCLHASAHKIKDPAGIINTHAIVIRNAGRIAAKNVRVGHYVFPELS
CTVTPPIEYEKKEIEGGTELIFPTLVPQEQIVISYLYFPPITIRDVNTYVKSDEGFAKILNIIPSPKLPGWLEKILYILL
FIGGVVVMRIIIQLIIFIFQSVSHFCVF
>Mature_188_residues
MDLSIIINTIATLATVFISFVLSKYLYNRAKLVTYCLHASAHKIKDPAGIINTHAIVIRNAGRIAAKNVRVGHYVFPELS
CTVTPPIEYEKKEIEGGTELIFPTLVPQEQIVISYLYFPPITIRDVNTYVKSDEGFAKILNIIPSPKLPGWLEKILYILL
FIGGVVVMRIIIQLIIFIFQSVSHFCVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21181; Mature: 21181

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSIIINTIATLATVFISFVLSKYLYNRAKLVTYCLHASAHKIKDPAGIINTHAIVIRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEEC
AGRIAAKNVRVGHYVFPELSCTVTPPIEYEKKEIEGGTELIFPTLVPQEQIVISYLYFPP
CCCEEECCEEECEEECCCCCEEECCCCCCCHHHCCCCCEEEECCCCCCHHHHEEEHCCCC
ITIRDVNTYVKSDEGFAKILNIIPSPKLPGWLEKILYILLFIGGVVVMRIIIQLIIFIFQ
EEEEECHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSHFCVF
HHHHHHCC
>Mature Secondary Structure
MDLSIIINTIATLATVFISFVLSKYLYNRAKLVTYCLHASAHKIKDPAGIINTHAIVIRN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEEEEEEC
AGRIAAKNVRVGHYVFPELSCTVTPPIEYEKKEIEGGTELIFPTLVPQEQIVISYLYFPP
CCCEEECCEEECEEECCCCCEEECCCCCCCHHHCCCCCEEEECCCCCCHHHHEEEHCCCC
ITIRDVNTYVKSDEGFAKILNIIPSPKLPGWLEKILYILLFIGGVVVMRIIIQLIIFIFQ
EEEEECHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVSHFCVF
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA