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The map label for this gene is 54293129

Identifier: 54293129

GI number: 54293129

Start: 197355

End: 198542

Strand: Direct

Name: 54293129

Synonym: lpl0168

Alternate gene names: NA

Gene position: 197355-198542 (Clockwise)

Preceding gene: 54293128

Following gene: 54293131

Centisome position: 5.9

GC content: 36.11

Gene sequence:

>1188_bases
ATGATTTTTGGAATTTTAAACCTAACGTTTTGGGGATATGTTTTAGCAACTTTTGTTCTAACTCAAATTACCATTGCTTC
GGTCACTCTTTATTTGCATCGTTATCAAACTCATCGTGCTTTAACCATGCACCCAATAGTGAGCCATTTTTTTCGATTCT
GGATTTGGTTAACAACCGGTATGGTGACAAGAGTCTGGGTTGCTATCCATCGTAAACACCATGCAATGACAGATGTTGAG
GGAGACCCTCACAGCCCCCAAATCTTTAGTCTTAAAAAGGTCTTCTGGCAAGTTCCTGAATTGTATCGCGAAGCAGCAAA
AGATAAAGATATGATTGAAAAGTATTCTCATGGCACTCCAAACGACTGGATTGAACGCAATCTGTACTCTCGCTATTCCA
GCAAGGGTATACTACTTATGTTTCTAATTGATTTGCTGCTGTTTGGTTTTCCTGGAATTACTATTTGGGCAATACAAATG
ATTTGGATTCCGCTCTCAGCAGGTGTAGTAAATGGAGTGGGGCATTATTGGGGATATCGCAATTTTGAATGCTTTGATAG
GTCAACCAATGTATTTCCTTTGGGCTTTCTAATAGGTGGAGAGGAACTTCATAATAATCACCACACTTACGCTTCGTCTG
CTAAATTTTCTGTGAAATGGTGGGAGTTCGATTTGGGCTGGTTTTATATACGTTGCCTATCTTTTTTAAGGCTTGCCAAG
GTAAAAAAACTACCTCCCAAATTGATAAGAGACAATAGCAAACAATATGTTGATTTAAATACGATAAAAGCCATCACTAG
TAATCGTTTTCAAGTTATGTCCGATTACTACAAAAGGGTTACTATTCCCATTTTGAAAAATGAAAAACAAAACTATAACT
ATATTAAAAATAAAAAAGAATGGTATTTATTTAAGGGAGCTAAACGTTTATTACGCCAAGAAACCAAAAAAGCTAATTAT
CATTTGCTAGCCCTGCTCAATCGTTTTGAGCAATTGCAGCTTGTTTATAATTATCGCCAATCATTGCAGCAAATTTGGTT
AAAAAAAGTATCATCTCAAAATGAGTTAATTGAATCTTTAAACCAATGGTGCAAAAAAGCGGAAGAATCAGGTCTGGATG
TATTGCGTCAATTTTCTCTTCGAATAAAAAGCTATGTTTTAATTGGGACAGATAGCTCATCAGTGTAA

Upstream 100 bases:

>100_bases
CATGTAATGAATTCAAACTTGGAGAAAAGGAAAAATATCCAGTTTTGAGAATAATGTGGAAAAAGGGGGGTTGCTTAAGT
ACAGACAATGAGGCTTCCCT

Downstream 100 bases:

>100_bases
GCTCTGCAACAAAAGTGAATAGGATTTCGTGGTTTATACTATGCAATTGATAAGTATTGGTACTAATCAAAAAAACGTGA
ATAAAACGCACGCATTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Ac Id Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Acyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MIFGILNLTFWGYVLATFVLTQITIASVTLYLHRYQTHRALTMHPIVSHFFRFWIWLTTGMVTRVWVAIHRKHHAMTDVE
GDPHSPQIFSLKKVFWQVPELYREAAKDKDMIEKYSHGTPNDWIERNLYSRYSSKGILLMFLIDLLLFGFPGITIWAIQM
IWIPLSAGVVNGVGHYWGYRNFECFDRSTNVFPLGFLIGGEELHNNHHTYASSAKFSVKWWEFDLGWFYIRCLSFLRLAK
VKKLPPKLIRDNSKQYVDLNTIKAITSNRFQVMSDYYKRVTIPILKNEKQNYNYIKNKKEWYLFKGAKRLLRQETKKANY
HLLALLNRFEQLQLVYNYRQSLQQIWLKKVSSQNELIESLNQWCKKAEESGLDVLRQFSLRIKSYVLIGTDSSSV

Sequences:

>Translated_395_residues
MIFGILNLTFWGYVLATFVLTQITIASVTLYLHRYQTHRALTMHPIVSHFFRFWIWLTTGMVTRVWVAIHRKHHAMTDVE
GDPHSPQIFSLKKVFWQVPELYREAAKDKDMIEKYSHGTPNDWIERNLYSRYSSKGILLMFLIDLLLFGFPGITIWAIQM
IWIPLSAGVVNGVGHYWGYRNFECFDRSTNVFPLGFLIGGEELHNNHHTYASSAKFSVKWWEFDLGWFYIRCLSFLRLAK
VKKLPPKLIRDNSKQYVDLNTIKAITSNRFQVMSDYYKRVTIPILKNEKQNYNYIKNKKEWYLFKGAKRLLRQETKKANY
HLLALLNRFEQLQLVYNYRQSLQQIWLKKVSSQNELIESLNQWCKKAEESGLDVLRQFSLRIKSYVLIGTDSSSV
>Mature_395_residues
MIFGILNLTFWGYVLATFVLTQITIASVTLYLHRYQTHRALTMHPIVSHFFRFWIWLTTGMVTRVWVAIHRKHHAMTDVE
GDPHSPQIFSLKKVFWQVPELYREAAKDKDMIEKYSHGTPNDWIERNLYSRYSSKGILLMFLIDLLLFGFPGITIWAIQM
IWIPLSAGVVNGVGHYWGYRNFECFDRSTNVFPLGFLIGGEELHNNHHTYASSAKFSVKWWEFDLGWFYIRCLSFLRLAK
VKKLPPKLIRDNSKQYVDLNTIKAITSNRFQVMSDYYKRVTIPILKNEKQNYNYIKNKKEWYLFKGAKRLLRQETKKANY
HLLALLNRFEQLQLVYNYRQSLQQIWLKKVSSQNELIESLNQWCKKAEESGLDVLRQFSLRIKSYVLIGTDSSSV

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46779; Mature: 46779

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGILNLTFWGYVLATFVLTQITIASVTLYLHRYQTHRALTMHPIVSHFFRFWIWLTTG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVTRVWVAIHRKHHAMTDVEGDPHSPQIFSLKKVFWQVPELYREAAKDKDMIEKYSHGTP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
NDWIERNLYSRYSSKGILLMFLIDLLLFGFPGITIWAIQMIWIPLSAGVVNGVGHYWGYR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFECFDRSTNVFPLGFLIGGEELHNNHHTYASSAKFSVKWWEFDLGWFYIRCLSFLRLAK
CCCCCCCCCCEEEEEEEECCHHHHCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHH
VKKLPPKLIRDNSKQYVDLNTIKAITSNRFQVMSDYYKRVTIPILKNEKQNYNYIKNKKE
HHCCCHHHHCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHEEEEHCCCCCCCCCHHCCCCC
WYLFKGAKRLLRQETKKANYHLLALLNRFEQLQLVYNYRQSLQQIWLKKVSSQNELIESL
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NQWCKKAEESGLDVLRQFSLRIKSYVLIGTDSSSV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
>Mature Secondary Structure
MIFGILNLTFWGYVLATFVLTQITIASVTLYLHRYQTHRALTMHPIVSHFFRFWIWLTTG
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
MVTRVWVAIHRKHHAMTDVEGDPHSPQIFSLKKVFWQVPELYREAAKDKDMIEKYSHGTP
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
NDWIERNLYSRYSSKGILLMFLIDLLLFGFPGITIWAIQMIWIPLSAGVVNGVGHYWGYR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NFECFDRSTNVFPLGFLIGGEELHNNHHTYASSAKFSVKWWEFDLGWFYIRCLSFLRLAK
CCCCCCCCCCEEEEEEEECCHHHHCCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHH
VKKLPPKLIRDNSKQYVDLNTIKAITSNRFQVMSDYYKRVTIPILKNEKQNYNYIKNKKE
HHCCCHHHHCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHEEEEHCCCCCCCCCHHCCCCC
WYLFKGAKRLLRQETKKANYHLLALLNRFEQLQLVYNYRQSLQQIWLKKVSSQNELIESL
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NQWCKKAEESGLDVLRQFSLRIKSYVLIGTDSSSV
HHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA