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The map label for this gene is prpA

Identifier: 54293108

GI number: 54293108

Start: 181038

End: 181742

Strand: Reverse

Name: prpA

Synonym: lpl0147

Alternate gene names: NA

Gene position: 181742-181038 (Counterclockwise)

Preceding gene: 54293126

Following gene: 54293105

Centisome position: 5.43

GC content: 41.42

Gene sequence:

>705_bases
ATGGTTAACTCTCATTTTTTAGGGGTAAATTTGACTGAGCTGAATATCAAAAAGGAAATTGGCAAACGTATTCTTGAAGC
AAGGAAGGCTAAAGGCTTGACGTTAAAGGCTCTTGGCGAGCTTGCCGGAGGGTTGAAACAAACGCGCCTGACTAATTGGG
AACAGGGTGTGCGTACTCCGGGACCGGAAGAGATTAAGTCGCTGGCGGAGGCACTGGATGTTTCACCTGCTTATTTGATG
TGTTTGTCGGATGAGGCACAGGTAAAAGTCGTAAAAAAAACCAGTCACTTAATTCCGCTTTTGGATCATCATCAGGCTTG
CCAAGCAAGGTTGCATGTCAATACAATTCGTGTACAAGGTACATGTGGCGATGCTGCCTTAATTTCTGTAAGTGCTGCAT
TATTACCAGAATTGAGTGATGAAGCATTTGCGCTTAAAATGACAGACGAAAGTATGATGCCAGAAATACGAGTCGGCGAT
GTGTTGATAGTTGATCCATCTATTGAGCCAGCACCAGGAGATTTTGTTGTTGTTAAAGTGCCTAGCATATCTAACGCGAT
TGTTTGTAAATATAGAAAACTATCTTATACGTCACCTGAATTTGAACTTCTGACAGCGAATGATAATTGGCCAAACATAA
CTGTAACTGCAGATATTGACGCTGAAATTATCGGTTCAATTCTTCAAAATCTAAGAAACTACTGA

Upstream 100 bases:

>100_bases
TTTTTATTTCTATAGTGTGATATCTTTATAAAAATAAAAGATTATTATTCACGATATGTGAATTTATAAGCTAATCTATA
TCACATAAAGTGATATTGCA

Downstream 100 bases:

>100_bases
TTCACAATCATAGAAGGTTGTAAGCTAAATCCTGAAGTAGAAACTAGAGAGAAAGAAATAGGCTGTCAGTTAATATTTAT
TTTTATCAAGGCCATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Repressor CI; XRE Family Transcriptional Regulator; Prophage Repressor CI-Like; LexA Repressor; LexA Family Repressor/S24 Family Protease

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MVNSHFLGVNLTELNIKKEIGKRILEARKAKGLTLKALGELAGGLKQTRLTNWEQGVRTPGPEEIKSLAEALDVSPAYLM
CLSDEAQVKVVKKTSHLIPLLDHHQACQARLHVNTIRVQGTCGDAALISVSAALLPELSDEAFALKMTDESMMPEIRVGD
VLIVDPSIEPAPGDFVVVKVPSISNAIVCKYRKLSYTSPEFELLTANDNWPNITVTADIDAEIIGSILQNLRNY

Sequences:

>Translated_234_residues
MVNSHFLGVNLTELNIKKEIGKRILEARKAKGLTLKALGELAGGLKQTRLTNWEQGVRTPGPEEIKSLAEALDVSPAYLM
CLSDEAQVKVVKKTSHLIPLLDHHQACQARLHVNTIRVQGTCGDAALISVSAALLPELSDEAFALKMTDESMMPEIRVGD
VLIVDPSIEPAPGDFVVVKVPSISNAIVCKYRKLSYTSPEFELLTANDNWPNITVTADIDAEIIGSILQNLRNY
>Mature_234_residues
MVNSHFLGVNLTELNIKKEIGKRILEARKAKGLTLKALGELAGGLKQTRLTNWEQGVRTPGPEEIKSLAEALDVSPAYLM
CLSDEAQVKVVKKTSHLIPLLDHHQACQARLHVNTIRVQGTCGDAALISVSAALLPELSDEAFALKMTDESMMPEIRVGD
VLIVDPSIEPAPGDFVVVKVPSISNAIVCKYRKLSYTSPEFELLTANDNWPNITVTADIDAEIIGSILQNLRNY

Specific function: Unknown

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25552; Mature: 25552

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNSHFLGVNLTELNIKKEIGKRILEARKAKGLTLKALGELAGGLKQTRLTNWEQGVRTP
CCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCHHHCCCCC
GPEEIKSLAEALDVSPAYLMCLSDEAQVKVVKKTSHLIPLLDHHQACQARLHVNTIRVQG
CHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHCHHHHHHEEEEEEEEEEE
TCGDAALISVSAALLPELSDEAFALKMTDESMMPEIRVGDVLIVDPSIEPAPGDFVVVKV
CCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCEEECCEEEECCCCCCCCCCEEEEEC
PSISNAIVCKYRKLSYTSPEFELLTANDNWPNITVTADIDAEIIGSILQNLRNY
CCCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNSHFLGVNLTELNIKKEIGKRILEARKAKGLTLKALGELAGGLKQTRLTNWEQGVRTP
CCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCHHHCCCCC
GPEEIKSLAEALDVSPAYLMCLSDEAQVKVVKKTSHLIPLLDHHQACQARLHVNTIRVQG
CHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHCHHHHHHEEEEEEEEEEE
TCGDAALISVSAALLPELSDEAFALKMTDESMMPEIRVGDVLIVDPSIEPAPGDFVVVKV
CCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCEEECCEEEECCCCCCCCCCEEEEEC
PSISNAIVCKYRKLSYTSPEFELLTANDNWPNITVTADIDAEIIGSILQNLRNY
CCCCCEEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA