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The map label for this gene is ygfB [C]

Identifier: 54293041

GI number: 54293041

Start: 90915

End: 91496

Strand: Direct

Name: ygfB [C]

Synonym: lpl0078

Alternate gene names: 54293041

Gene position: 90915-91496 (Clockwise)

Preceding gene: 54293038

Following gene: 54293042

Centisome position: 2.72

GC content: 41.07

Gene sequence:

>582_bases
ATGTCTTTAGATAATGATTCGCTGCATTTACCTAACTACGATGACTTTGTGCAATCCATTTCTGTTTTAGCATTAACTAT
GTCCGGAAGCGAATTACACGGAATCATGTGCGGTTATTTGTGTGCAGGGGCTGATAGTCAAGGCGAGGCTTACATACGTG
CTTTGCTAAATAATAAAAAAGATGAGCAAAGCCGTAATGCGTTATTATCCATGTTTTCTGTCTTTTCAATTAGCCAGCAA
CAAATGAATAATTTTGATTTTGAATTTGAAATGTTATTGCCCGATGACGATGAATCTTTAGTCACTCGTGCTCAGGCTTT
TAGTGAGTGGTGTGAAGGATTTACGCAAGGGTTAACTATTGCAGGAGTTGGGATGGAGCAGTTTTATGAGGAGGAATCTC
AGGATGCTCTTCAGCATCTTATGGAATTTGCAGAGCTGGACTGTGAGTCTTTGGAGGTAGGCGAGGAAGATGAGAGAGCG
TTGATGGAGGTCAGTGAATACACTCGTATGGCAGTACTTCGATTACACAGTGATTTGGTTTTGCACGAAAGAGAACTTGG
AGATTCTGGAACAACCCATTGA

Upstream 100 bases:

>100_bases
TGCAGCAAATTATGAAAATCATAGGTGCTGAGAAAGTGCAGCAGGTGAACACTGATTCTAAATGGAGTATCATTAGCTAT
CTTTTTAAATAGGGTTAAAT

Downstream 100 bases:

>100_bases
TAGCAAGTTGATAAAGTATCGAAGTTGTTTGTATTTATTGGTTTCTTTGATTTTTTAAGGATTGCTCATTTGTTCTATTT
ATTAAAGTGAAAAGGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSLDNDSLHLPNYDDFVQSISVLALTMSGSELHGIMCGYLCAGADSQGEAYIRALLNNKKDEQSRNALLSMFSVFSISQQ
QMNNFDFEFEMLLPDDDESLVTRAQAFSEWCEGFTQGLTIAGVGMEQFYEEESQDALQHLMEFAELDCESLEVGEEDERA
LMEVSEYTRMAVLRLHSDLVLHERELGDSGTTH

Sequences:

>Translated_193_residues
MSLDNDSLHLPNYDDFVQSISVLALTMSGSELHGIMCGYLCAGADSQGEAYIRALLNNKKDEQSRNALLSMFSVFSISQQ
QMNNFDFEFEMLLPDDDESLVTRAQAFSEWCEGFTQGLTIAGVGMEQFYEEESQDALQHLMEFAELDCESLEVGEEDERA
LMEVSEYTRMAVLRLHSDLVLHERELGDSGTTH
>Mature_192_residues
SLDNDSLHLPNYDDFVQSISVLALTMSGSELHGIMCGYLCAGADSQGEAYIRALLNNKKDEQSRNALLSMFSVFSISQQQ
MNNFDFEFEMLLPDDDESLVTRAQAFSEWCEGFTQGLTIAGVGMEQFYEEESQDALQHLMEFAELDCESLEVGEEDERAL
MEVSEYTRMAVLRLHSDLVLHERELGDSGTTH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

Organism=Escherichia coli, GI87082182, Length=177, Percent_Identity=27.1186440677966, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 21745; Mature: 21614

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDNDSLHLPNYDDFVQSISVLALTMSGSELHGIMCGYLCAGADSQGEAYIRALLNNKK
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
DEQSRNALLSMFSVFSISQQQMNNFDFEFEMLLPDDDESLVTRAQAFSEWCEGFTQGLTI
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE
AGVGMEQFYEEESQDALQHLMEFAELDCESLEVGEEDERALMEVSEYTRMAVLRLHSDLV
EECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LHERELGDSGTTH
HHHHHCCCCCCCC
>Mature Secondary Structure 
SLDNDSLHLPNYDDFVQSISVLALTMSGSELHGIMCGYLCAGADSQGEAYIRALLNNKK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
DEQSRNALLSMFSVFSISQQQMNNFDFEFEMLLPDDDESLVTRAQAFSEWCEGFTQGLTI
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEE
AGVGMEQFYEEESQDALQHLMEFAELDCESLEVGEEDERALMEVSEYTRMAVLRLHSDLV
EECCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LHERELGDSGTTH
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA