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The map label for this gene is 54293018

Identifier: 54293018

GI number: 54293018

Start: 58763

End: 59467

Strand: Reverse

Name: 54293018

Synonym: lpl0054

Alternate gene names: NA

Gene position: 59467-58763 (Counterclockwise)

Preceding gene: 54293023

Following gene: 54293017

Centisome position: 1.78

GC content: 37.3

Gene sequence:

>705_bases
ATGATAAGAGAATGCATGGATAAGAGAAACAACCAATTTACTACCGAAATTTTAAATTATTTTAGTGACCTAAAAAAATT
TTCGACGAGTTATCTTGAATGGATAACCATGGAGCATTATCAATTTTCGTTAAACAATACCCGTTTCTTAATGAATTCTC
ATTTCCAAACCAAGTCACTTTCTGATCCCGGAGTTTCTGAAGAGTTACTCGCTAACTATAACGAAGAAAAAAATCATGCT
CAAATGTATCGGCATGCACTAAAAAAAATCGGCCTGGATGTAACAAACAGGATTCCGTATGTGGCAACCAGGCAGTTTTT
TATGCGCCTTGAAGCCTCAATTGAGATTAATGCATCCAAAACCCTTGGCGTTATGTACGCTACTGAAACAGCTGCAATAT
TTGAGCATATTTTATTTAAAGAAATAAGCGCCGAGCTTTGTCAAAGAAAACGTTTGGATTTTGAGAATTCTCGCATCAAG
CAATTCCATGATTTACACCTGGATGGAGTAGAACAGGCACATAAAGATGAGTTAGGCAAATTTATGGATCATACACTTGC
TGAAGAGCACGTTGATCCCAATATTTTTCTCCAGGAAAAAGAAATAATGGATGGCGCGTATGCGGCGATCGATATAATGG
AAGATTGGTGGTCCGGTTTAATTAACGCAAAAGCACACCTTTTGGAACAAGCTCATGCTCAATAA

Upstream 100 bases:

>100_bases
AAAATTATCAAGATAATTATAAAATAATATTTTAATTATATGATCTTTATAGTTATGGTAAACCCTTGATGAATTGATTT
TAATACTGACTGGAGGCTTC

Downstream 100 bases:

>100_bases
ACTTATGTGGCTAACTGGCAAGGCGCAAGAAGACTGGATAGAGAAAATTCTACATTTACGACAAAAGATTTGGCCTGATT
ATCAACGCATTAAAAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MIRECMDKRNNQFTTEILNYFSDLKKFSTSYLEWITMEHYQFSLNNTRFLMNSHFQTKSLSDPGVSEELLANYNEEKNHA
QMYRHALKKIGLDVTNRIPYVATRQFFMRLEASIEINASKTLGVMYATETAAIFEHILFKEISAELCQRKRLDFENSRIK
QFHDLHLDGVEQAHKDELGKFMDHTLAEEHVDPNIFLQEKEIMDGAYAAIDIMEDWWSGLINAKAHLLEQAHAQ

Sequences:

>Translated_234_residues
MIRECMDKRNNQFTTEILNYFSDLKKFSTSYLEWITMEHYQFSLNNTRFLMNSHFQTKSLSDPGVSEELLANYNEEKNHA
QMYRHALKKIGLDVTNRIPYVATRQFFMRLEASIEINASKTLGVMYATETAAIFEHILFKEISAELCQRKRLDFENSRIK
QFHDLHLDGVEQAHKDELGKFMDHTLAEEHVDPNIFLQEKEIMDGAYAAIDIMEDWWSGLINAKAHLLEQAHAQ
>Mature_234_residues
MIRECMDKRNNQFTTEILNYFSDLKKFSTSYLEWITMEHYQFSLNNTRFLMNSHFQTKSLSDPGVSEELLANYNEEKNHA
QMYRHALKKIGLDVTNRIPYVATRQFFMRLEASIEINASKTLGVMYATETAAIFEHILFKEISAELCQRKRLDFENSRIK
QFHDLHLDGVEQAHKDELGKFMDHTLAEEHVDPNIFLQEKEIMDGAYAAIDIMEDWWSGLINAKAHLLEQAHAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27458; Mature: 27458

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRECMDKRNNQFTTEILNYFSDLKKFSTSYLEWITMEHYQFSLNNTRFLMNSHFQTKSL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCC
SDPGVSEELLANYNEEKNHAQMYRHALKKIGLDVTNRIPYVATRQFFMRLEASIEINASK
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHEEECCCC
TLGVMYATETAAIFEHILFKEISAELCQRKRLDFENSRIKQFHDLHLDGVEQAHKDELGK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
FMDHTLAEEHVDPNIFLQEKEIMDGAYAAIDIMEDWWSGLINAKAHLLEQAHAQ
HHHHHHHHHHCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRECMDKRNNQFTTEILNYFSDLKKFSTSYLEWITMEHYQFSLNNTRFLMNSHFQTKSL
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCC
SDPGVSEELLANYNEEKNHAQMYRHALKKIGLDVTNRIPYVATRQFFMRLEASIEINASK
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHEEECCCC
TLGVMYATETAAIFEHILFKEISAELCQRKRLDFENSRIKQFHDLHLDGVEQAHKDELGK
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
FMDHTLAEEHVDPNIFLQEKEIMDGAYAAIDIMEDWWSGLINAKAHLLEQAHAQ
HHHHHHHHHHCCCCEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA