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The map label for this gene is 54293000

Identifier: 54293000

GI number: 54293000

Start: 43406

End: 44128

Strand: Reverse

Name: 54293000

Synonym: lpl0036

Alternate gene names: NA

Gene position: 44128-43406 (Counterclockwise)

Preceding gene: 54293001

Following gene: 54292997

Centisome position: 1.32

GC content: 38.31

Gene sequence:

>723_bases
ATGAATTATCAATATTCCCCCAGCCTAAAGAAAAAATTCCTGCTCGCATTGACTACTTTATTTATTGTACAAATGTTCTA
TTTTGCCTCTGTTAGAGCATCAACAAGGGATACTCAAGTATGGACACTTATGAATGCGATAGGACCAATCAATAAGCAGC
ATCGCAAAATAAGATATTGGCTTGAGATACAAGATAGAGTTGGTGAAAATATTTCGCAATTGTCCCAACTGATATTACGC
CCTGGCATAGGATATGAACTCTTGCCCACAACAACTATCTGGCTCGGATATGATAGAATTTATACTGCGCAACCATTTGC
CAACCCTCCTGTAAACGAAAATCGAGTTTGGCAACAATTATTGTGGAGCAAGGAATATACTCGCTTAAGACTTACTGCCC
GTTCGCGTTTGGAAGAGCGCTTTATCCAAAGAGCTACTCATACCGCCTGGCGGTATAGACAATTATTTAAAACCAGTATT
TTTATTCCCAAACACCCTAAATACGCAGCCGTGATTAGTGATGAGGCTTTTTTTCATCTGAATGACTTCAATCTTCAACG
TAATCAAGGCTTTGATCAAAACCGTTTATTTGTTGGCTTAGGTTATAGAACCAGTAAAAACAGCACTATAGAGATTGGGT
ATCTCAATCAAATGATCAAACGCGTAAATAACCCTGACTATCGCGGAGATTATTTATCCATGGCTCTATTGTTAACAGAA
TAA

Upstream 100 bases:

>100_bases
CTCTCAGCTATTTTATAAAAAAATTGAACAATAAAATAAAAAATATTGACGATGGTTTCTCAAACCTGATGTGCAGCAAC
TTTTTAAGTCTTTTTAAACA

Downstream 100 bases:

>100_bases
ACAAGCGTACAAAACAAACCATTACTTTCAATGGTTTGTTTGAGAAAAATTGATTTAATTAAGTAGAACAAACTGCTTGC
AATTCTTGATTACCCAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNYQYSPSLKKKFLLALTTLFIVQMFYFASVRASTRDTQVWTLMNAIGPINKQHRKIRYWLEIQDRVGENISQLSQLILR
PGIGYELLPTTTIWLGYDRIYTAQPFANPPVNENRVWQQLLWSKEYTRLRLTARSRLEERFIQRATHTAWRYRQLFKTSI
FIPKHPKYAAVISDEAFFHLNDFNLQRNQGFDQNRLFVGLGYRTSKNSTIEIGYLNQMIKRVNNPDYRGDYLSMALLLTE

Sequences:

>Translated_240_residues
MNYQYSPSLKKKFLLALTTLFIVQMFYFASVRASTRDTQVWTLMNAIGPINKQHRKIRYWLEIQDRVGENISQLSQLILR
PGIGYELLPTTTIWLGYDRIYTAQPFANPPVNENRVWQQLLWSKEYTRLRLTARSRLEERFIQRATHTAWRYRQLFKTSI
FIPKHPKYAAVISDEAFFHLNDFNLQRNQGFDQNRLFVGLGYRTSKNSTIEIGYLNQMIKRVNNPDYRGDYLSMALLLTE
>Mature_240_residues
MNYQYSPSLKKKFLLALTTLFIVQMFYFASVRASTRDTQVWTLMNAIGPINKQHRKIRYWLEIQDRVGENISQLSQLILR
PGIGYELLPTTTIWLGYDRIYTAQPFANPPVNENRVWQQLLWSKEYTRLRLTARSRLEERFIQRATHTAWRYRQLFKTSI
FIPKHPKYAAVISDEAFFHLNDFNLQRNQGFDQNRLFVGLGYRTSKNSTIEIGYLNQMIKRVNNPDYRGDYLSMALLLTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019619 [H]

Pfam domain/function: PF10677 DUF2490 [H]

EC number: NA

Molecular weight: Translated: 28502; Mature: 28502

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYQYSPSLKKKFLLALTTLFIVQMFYFASVRASTRDTQVWTLMNAIGPINKQHRKIRYW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHEEEE
LEIQDRVGENISQLSQLILRPGIGYELLPTTTIWLGYDRIYTAQPFANPPVNENRVWQQL
EEEHHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCCCCCCCCCHHHHHHHH
LWSKEYTRLRLTARSRLEERFIQRATHTAWRYRQLFKTSIFIPKHPKYAAVISDEAFFHL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEE
NDFNLQRNQGFDQNRLFVGLGYRTSKNSTIEIGYLNQMIKRVNNPDYRGDYLSMALLLTE
ECCCCCCCCCCCCCCEEEEECEEECCCCEEEEHHHHHHHHHCCCCCCCCHHHEEEEEECC
>Mature Secondary Structure
MNYQYSPSLKKKFLLALTTLFIVQMFYFASVRASTRDTQVWTLMNAIGPINKQHRKIRYW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHEEEE
LEIQDRVGENISQLSQLILRPGIGYELLPTTTIWLGYDRIYTAQPFANPPVNENRVWQQL
EEEHHHHCCCHHHHHHHHHCCCCCEEECCCEEEEEECCCEEECCCCCCCCCCHHHHHHHH
LWSKEYTRLRLTARSRLEERFIQRATHTAWRYRQLFKTSIFIPKHPKYAAVISDEAFFHL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEE
NDFNLQRNQGFDQNRLFVGLGYRTSKNSTIEIGYLNQMIKRVNNPDYRGDYLSMALLLTE
ECCCCCCCCCCCCCCEEEEECEEECCCCEEEEHHHHHHHHHCCCCCCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]